Difference between revisions of "TSS:Hg 116666.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:30531 | ||
| + | |chr=chr11 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance_to_tss=- | + | |distance=7 |
| − | |entrez_id= | + | |distance_to_tss=-493 |
| + | |end=111924238 | ||
| + | |end_of_center_position=111924234 | ||
| + | |entrez_id=1410 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
| − | |gene_alias= | + | |gene_alias=CMD1II{{!}}CRYA2{{!}}CTPP2{{!}}CTRCT16{{!}}HEL-S-101{{!}}HSPB5{{!}}MFM2 |
| − | |gene_description= | + | |gene_description=crystallin alpha B |
| − | |gene_name= | + | |gene_id=91894 |
| + | |gene_name=chromosome 11 open reading frame 52 | ||
| + | |gene_source=HGNC:30531 | ||
| + | |gene_symbol=C11orf52 | ||
| + | |gene_synonyms=FLJ25219 MGC14839 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |nearest_ensembl= | + | |hgnc_mgi_id=HGNC:30531 |
| − | |nearest_promoter_id= | + | |nearest_ensembl=ENSG00000109846 |
| − | |nearest_refseq= | + | |nearest_promoter_id=NM_001368245 |
| − | |nearest_unigene=Hs. | + | |nearest_refseq=NM_001885 |
| + | |nearest_unigene=Hs.53454 | ||
| + | |num_trans=91894 | ||
| + | |species=human | ||
| + | |start=111924228 | ||
| + | |start_of_center_position=111924233 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000529012.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_116666.1 | |tss_id=hg_116666.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 23:35, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 111924233 |
|---|---|
| End of the center position in the TSS region: | 111924234 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000529012.1 |
|---|---|
| Distance: | 7 |
| Num_trans: | 91894 |
| All_trans: | HGNC:30531 |
TATA-Box annotation
| Distance to TSS: | -493 |
|---|---|
| Nearest PromoterID: | NM_001368245 |
| Entrez ID: | 1410 |
| Nearest Unigene: | Hs.53454 |
| Nearest Refseq: | NM_001885 |
| Nearest Ensembl: | ENSG00000109846 |
| Gene Name: | chromosome 11 open reading frame 52 |
| Gene Alias: | CMD1II|CRYA2|CTPP2|CTRCT16|HEL-S-101|HSPB5|MFM2 |
| Gene Description: | crystallin alpha B |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
