Difference between revisions of "TSS:Hg 52007.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000510233.5:133 ENST00000507069.5:133 ENST00000513005.5:133 ENST00000509716.2:133 uc062win.1:133 uc062wio.1:133 uc062wip.1:133 uc062wiu.1:133 AB38...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:4076 |
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=524 | |distance_to_tss=524 | ||
|end=46388864 | |end=46388864 | ||
| + | |end_of_center_position=46388855 | ||
|entrez_id=2555 | |entrez_id=2555 | ||
|gc_percent=0.373134 | |gc_percent=0.373134 | ||
| Line 11: | Line 12: | ||
|gene_description=gamma-aminobutyric acid type A receptor alpha2 subunit | |gene_description=gamma-aminobutyric acid type A receptor alpha2 subunit | ||
|gene_id=2555 | |gene_id=2555 | ||
| − | |gene_name=gamma-aminobutyric acid type A receptor alpha2 | + | |gene_name=gamma-aminobutyric acid type A receptor subunit alpha2 |
|gene_source=HGNC:4076 | |gene_source=HGNC:4076 | ||
|gene_symbol=GABRA2 | |gene_symbol=GABRA2 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_000807 | |nearest_refseq=NM_000807 | ||
|nearest_unigene=Hs.48372 | |nearest_unigene=Hs.48372 | ||
| − | |num_trans= | + | |num_trans=2555 |
|species=human | |species=human | ||
|start=46388845 | |start=46388845 | ||
| + | |start_of_center_position=46388854 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-37(GTCCATAAAAAA,-,0.00) |
| − | |transcript_name=ENST00000510233.5 ENST00000507069.5 ENST00000513005.5 ENST00000509716.2 | + | |transcript_name=ENST00000510233.5 ENST00000507069.5 ENST00000513005.5 ENST00000509716.2 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_52007.1 | |tss_id=hg_52007.1 | ||
Latest revision as of 01:22, 22 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 46388854 |
|---|---|
| End of the center position in the TSS region: | 46388855 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000510233.5 ENST00000507069.5 ENST00000513005.5 ENST00000509716.2 |
|---|---|
| Distance: | 133 |
| Num_trans: | 2555 |
| All_trans: | HGNC:4076 |
TATA-Box annotation
| Distance to TSS: | 524 |
|---|---|
| Nearest PromoterID: | NM_001114175 |
| Entrez ID: | 2555 |
| Nearest Unigene: | Hs.48372 |
| Nearest Refseq: | NM_000807 |
| Nearest Ensembl: | ENSG00000151834 |
| Gene Name: | gamma-aminobutyric acid type A receptor subunit alpha2 |
| Gene Alias: | - |
| Gene Description: | gamma-aminobutyric acid type A receptor alpha2 subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.373134 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -37(GTCCATAAAAAA,-,0.00) |
