Difference between revisions of "TSS:Hg 52042.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |CRN= |
| + | |Lrp4= | ||
| + | |PEE5= | ||
| + | |TMPRSS10= | ||
| + | |all_trans=HGNC:19012 | ||
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=1 |
|end=47838077 | |end=47838077 | ||
| + | |end_of_center_position=47838066 | ||
|entrez_id=10699 | |entrez_id=10699 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
| − | |gene_alias=ATC2 | + | |gene_alias=ATC2{{!}}CRN{{!}}Lrp4{{!}}PEE5{{!}}TMPRSS10 |
| − | |gene_description= | + | |gene_description=corin, serine peptidase |
|gene_id=10699 | |gene_id=10699 | ||
| − | |gene_name= | + | |gene_name=corin, serine peptidase |
|gene_source=HGNC:19012 | |gene_source=HGNC:19012 | ||
|gene_symbol=CORIN | |gene_symbol=CORIN | ||
| Line 18: | Line 23: | ||
|hgnc_mgi_id=HGNC:19012 | |hgnc_mgi_id=HGNC:19012 | ||
|nearest_ensembl=ENSG00000145244 | |nearest_ensembl=ENSG00000145244 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_006587 |
|nearest_refseq=NM_006587 | |nearest_refseq=NM_006587 | ||
|nearest_unigene=Hs.518618 | |nearest_unigene=Hs.518618 | ||
| − | |num_trans= | + | |num_trans=10699 |
|species=human | |species=human | ||
|start=47838054 | |start=47838054 | ||
| + | |start_of_center_position=47838065 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000502252.5 ENST00000503821.5 | + | |transcript_name=ENST00000273857.9 ENST00000502252.5 ENST00000503821.5 AK304038 AK297675 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_52042.1 | |tss_id=hg_52042.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B4E1Y7 B7Z4R1 J3KR88 | + | |uniprot_id=B4E1Y7 B7Z4R1 J3KR83 J3KR88 Q9Y5Q5 |
}} | }} | ||
Latest revision as of 01:23, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 47838065 |
|---|---|
| End of the center position in the TSS region: | 47838066 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000273857.9 ENST00000502252.5 ENST00000503821.5 AK304038 AK297675 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10699 |
| All_trans: | HGNC:19012 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_006587 |
| Entrez ID: | 10699 |
| Nearest Unigene: | Hs.518618 |
| Nearest Refseq: | NM_006587 |
| Nearest Ensembl: | ENSG00000145244 |
| Gene Name: | corin, serine peptidase |
| Gene Alias: | ATC2|CRN|Lrp4|PEE5|TMPRSS10 |
| Gene Description: | corin, serine peptidase |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
