Difference between revisions of "TSS:Hg 118120.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.035 |distance_to_tss=201 |entrez_id=283120 |gc_percent=0.59204 |gene_alias=ASM|ASM1|BWS|D11S813E|LINC00008|NCRNA00008|WT2 |gene_description="H19, im...") |
|||
| (4 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |ASM1= | ||
| + | |BWS= | ||
| + | |D11S813E= | ||
| + | |LINC00008= | ||
| + | |NCRNA00008= | ||
| + | |WT2= | ||
| + | |all_trans=HGNC:4713 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| + | |distance=0 | ||
|distance_to_tss=201 | |distance_to_tss=201 | ||
| + | |end=2001271 | ||
| + | |end_of_center_position=2001266 | ||
|entrez_id=283120 | |entrez_id=283120 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias=ASM | + | |gene_alias=ASM{{!}}ASM1{{!}}BWS{{!}}D11S813E{{!}}LINC00008{{!}}MIR675HG{{!}}NCRNA00008{{!}}WT2 |
| − | |gene_description= | + | |gene_description=H19 imprinted maternally expressed transcript |
| − | |gene_name=H19 | + | |gene_id=283120 |
| + | |gene_name=H19 imprinted maternally expressed transcript | ||
| + | |gene_source=HGNC:4713 | ||
| + | |gene_symbol=H19 | ||
| + | |gene_synonyms=ASM ASM1 D11S813E LINC00008 MIR675HG NCRNA00008 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:4713 | ||
|nearest_ensembl=ENSG00000130600 | |nearest_ensembl=ENSG00000130600 | ||
|nearest_promoter_id=NR_131224 | |nearest_promoter_id=NR_131224 | ||
|nearest_refseq=NR_002196 | |nearest_refseq=NR_002196 | ||
|nearest_unigene=Hs.533566 | |nearest_unigene=Hs.533566 | ||
| + | |num_trans=283120 | ||
| + | |species=human | ||
| + | |start=2001259 | ||
| + | |start_of_center_position=2001265 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000422826.2 | ||
| + | |tss_classification=no | ||
|tss_id=hg_118120.1 | |tss_id=hg_118120.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 00:07, 20 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 2001265 |
|---|---|
| End of the center position in the TSS region: | 2001266 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000422826.2 |
|---|---|
| Distance: | 0 |
| Num_trans: | 283120 |
| All_trans: | HGNC:4713 |
TATA-Box annotation
| Distance to TSS: | 201 |
|---|---|
| Nearest PromoterID: | NR_131224 |
| Entrez ID: | 283120 |
| Nearest Unigene: | Hs.533566 |
| Nearest Refseq: | NR_002196 |
| Nearest Ensembl: | ENSG00000130600 |
| Gene Name: | H19 imprinted maternally expressed transcript |
| Gene Alias: | ASM|ASM1|BWS|D11S813E|LINC00008|MIR675HG|NCRNA00008|WT2 |
| Gene Description: | H19 imprinted maternally expressed transcript |
| Gene Type: | ncRNA |
| CpG%: | 0.035 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
