Difference between revisions of "TSS:Hg 59962.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000523372.1:0 uc063jhv.1:0 KJ896852:0 KR712069:0 KR712070:0 KR712071:0 AK315200:-1 AK299640:22 BC074795:-23 BC069348:-84 ENST00000522990.5:-117 uc...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |ECA2= |
| + | |GEFSP3= | ||
| + | |all_trans=HGNC:4087 | ||
|chr=chr5 | |chr=chr5 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=361 | |distance_to_tss=361 | ||
|end=162068016 | |end=162068016 | ||
| + | |end_of_center_position=162068004 | ||
|entrez_id=2566 | |entrez_id=2566 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
| − | |gene_alias=CAE2 | + | |gene_alias=CAE2{{!}}ECA2{{!}}EIEE74{{!}}FEB8{{!}}GEFSP3 |
|gene_description=gamma-aminobutyric acid type A receptor gamma2 subunit | |gene_description=gamma-aminobutyric acid type A receptor gamma2 subunit | ||
|gene_id=2566 | |gene_id=2566 | ||
| − | |gene_name=gamma-aminobutyric acid type A receptor gamma2 | + | |gene_name=gamma-aminobutyric acid type A receptor subunit gamma2 |
|gene_source=HGNC:4087 | |gene_source=HGNC:4087 | ||
|gene_symbol=GABRG2 | |gene_symbol=GABRG2 | ||
| Line 21: | Line 24: | ||
|nearest_refseq=NM_000816 | |nearest_refseq=NM_000816 | ||
|nearest_unigene=Hs.7195 | |nearest_unigene=Hs.7195 | ||
| − | |num_trans= | + | |num_trans=2566 |
|species=human | |species=human | ||
|start=162067990 | |start=162067990 | ||
| + | |start_of_center_position=162068003 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000641017.1 KR712069 KR712070 KR712071 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_59962.1 | |tss_id=hg_59962.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A286YFI6 |
}} | }} | ||
Latest revision as of 04:15, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 162068003 |
|---|---|
| End of the center position in the TSS region: | 162068004 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000641017.1 KR712069 KR712070 KR712071 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2566 |
| All_trans: | HGNC:4087 |
TATA-Box annotation
| Distance to TSS: | 361 |
|---|---|
| Nearest PromoterID: | NM_198904 |
| Entrez ID: | 2566 |
| Nearest Unigene: | Hs.7195 |
| Nearest Refseq: | NM_000816 |
| Nearest Ensembl: | ENSG00000113327 |
| Gene Name: | gamma-aminobutyric acid type A receptor subunit gamma2 |
| Gene Alias: | CAE2|ECA2|EIEE74|FEB8|GEFSP3 |
| Gene Description: | gamma-aminobutyric acid type A receptor gamma2 subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
