Difference between revisions of "TSS:Hg 69757.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000296978.3:147 uc003qca.5:147 AB067500:147 |chr=chr6 |cpg_percent=0.1 |distance=147 |distance_to_tss=-145 |end=130365587 |entrez_id=154075 |gc_pe...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:21075 |
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=147 | |distance=147 | ||
| − | |distance_to_tss= | + | |distance_to_tss=298 |
|end=130365587 | |end=130365587 | ||
| + | |end_of_center_position=130365571 | ||
|entrez_id=154075 | |entrez_id=154075 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_152552 | |nearest_refseq=NM_152552 | ||
|nearest_unigene=Hs.440508 | |nearest_unigene=Hs.440508 | ||
| − | |num_trans= | + | |num_trans=114801 |
|species=human | |species=human | ||
|start=130365553 | |start=130365553 | ||
| + | |start_of_center_position=130365570 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AB067500 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_69757.1 | |tss_id=hg_69757.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 07:48, 22 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 130365570 |
|---|---|
| End of the center position in the TSS region: | 130365571 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AB067500 |
|---|---|
| Distance: | 147 |
| Num_trans: | 114801 |
| All_trans: | HGNC:21075 |
TATA-Box annotation
| Distance to TSS: | 298 |
|---|---|
| Nearest PromoterID: | NM_001258275 |
| Entrez ID: | 154075 |
| Nearest Unigene: | Hs.440508 |
| Nearest Refseq: | NM_152552 |
| Nearest Ensembl: | ENSG00000164483 |
| Gene Name: | transmembrane protein 200A |
| Gene Alias: | - |
| Gene Description: | sterile alpha motif domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
