Difference between revisions of "TSS:Hg 7244.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000367501.7:0 uc001grg.5:0 NM_001105518:-16 AK127980:38 ENST00000367500.8:75 NM_017673:75 uc001grh.5:75 BC030781:75 AK315802:109 AK291443:209 ENST...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |MST070= |
| + | |MSTP070= | ||
| + | |TRM1L= | ||
| + | |all_trans=HGNC:16785 | ||
| + | |bG120K12.3= | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=18 | |distance_to_tss=18 | ||
|end=185157084 | |end=185157084 | ||
| + | |end_of_center_position=185157080 | ||
|entrez_id=81627 | |entrez_id=81627 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias=C1orf25 | + | |gene_alias=C1orf25{{!}}MST070{{!}}MSTP070{{!}}TRM1L{{!}}bG120K12.3 |
|gene_description=tRNA methyltransferase 1 like | |gene_description=tRNA methyltransferase 1 like | ||
|gene_id=54823 | |gene_id=54823 | ||
| − | |gene_name= | + | |gene_name=SWT1 RNA endoribonuclease homolog |
|gene_source=HGNC:16785 | |gene_source=HGNC:16785 | ||
|gene_symbol=SWT1 | |gene_symbol=SWT1 | ||
| Line 21: | Line 26: | ||
|nearest_refseq=NM_030934 | |nearest_refseq=NM_030934 | ||
|nearest_unigene=Hs.107149 | |nearest_unigene=Hs.107149 | ||
| − | |num_trans= | + | |num_trans=54823 |
|species=human | |species=human | ||
|start=185157075 | |start=185157075 | ||
| + | |start_of_center_position=185157079 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000367501.7 | + | |transcript_name=ENST00000367501.7 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_7244.1 | |tss_id=hg_7244.1 | ||
Latest revision as of 08:45, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 185157079 |
|---|---|
| End of the center position in the TSS region: | 185157080 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000367501.7 |
|---|---|
| Distance: | 0 |
| Num_trans: | 54823 |
| All_trans: | HGNC:16785 |
TATA-Box annotation
| Distance to TSS: | 18 |
|---|---|
| Nearest PromoterID: | NM_001202423 |
| Entrez ID: | 81627 |
| Nearest Unigene: | Hs.107149 |
| Nearest Refseq: | NM_030934 |
| Nearest Ensembl: | ENSG00000121486 |
| Gene Name: | SWT1 RNA endoribonuclease homolog |
| Gene Alias: | C1orf25|MST070|MSTP070|TRM1L|bG120K12.3 |
| Gene Description: | tRNA methyltransferase 1 like |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
