Difference between revisions of "TSS:Hg 7251.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000450350.1:-215 uc057nxr.1:-215 AK291443:-404 |chr=chr1 |cpg_percent=0.02 |distance=-215 |distance_to_tss=544 |end=185157710 |entrez_id=54823 |gc...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |HsSwt1= |
| + | |all_trans=HGNC:16785 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=-215 | |distance=-215 | ||
| − | |distance_to_tss= | + | |distance_to_tss=536 |
|end=185157710 | |end=185157710 | ||
| + | |end_of_center_position=185157704 | ||
|entrez_id=54823 | |entrez_id=54823 | ||
|gc_percent=0.41791 | |gc_percent=0.41791 | ||
| − | |gene_alias=C1orf26 | + | |gene_alias=C1orf26{{!}}HsSwt1 |
| − | |gene_description= | + | |gene_description=SWT1 RNA endoribonuclease homolog |
|gene_id=54823 | |gene_id=54823 | ||
| − | |gene_name= | + | |gene_name=SWT1 RNA endoribonuclease homolog |
|gene_source=HGNC:16785 | |gene_source=HGNC:16785 | ||
|gene_symbol=SWT1 | |gene_symbol=SWT1 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_017673 | |nearest_refseq=NM_017673 | ||
|nearest_unigene=Hs.134183 | |nearest_unigene=Hs.134183 | ||
| − | |num_trans= | + | |num_trans=54823 |
|species=human | |species=human | ||
|start=185157696 | |start=185157696 | ||
| + | |start_of_center_position=185157703 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=86(CTTTTAATAACC,+,0.00) |
| − | |transcript_name=ENST00000450350 | + | |transcript_name=ENST00000450350.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_7251.1 | |tss_id=hg_7251.1 | ||
Latest revision as of 08:47, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 185157703 |
|---|---|
| End of the center position in the TSS region: | 185157704 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000450350.1 |
|---|---|
| Distance: | -215 |
| Num_trans: | 54823 |
| All_trans: | HGNC:16785 |
TATA-Box annotation
| Distance to TSS: | 536 |
|---|---|
| Nearest PromoterID: | NM_017673 |
| Entrez ID: | 54823 |
| Nearest Unigene: | Hs.134183 |
| Nearest Refseq: | NM_017673 |
| Nearest Ensembl: | ENSG00000116668 |
| Gene Name: | SWT1 RNA endoribonuclease homolog |
| Gene Alias: | C1orf26|HsSwt1 |
| Gene Description: | SWT1 RNA endoribonuclease homolog |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.41791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 86(CTTTTAATAACC,+,0.00) |
