Difference between revisions of "TSS:Hg 121135.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:8059 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=39 | ||
|distance_to_tss=26890 | |distance_to_tss=26890 | ||
| + | |end=72041186 | ||
| + | |end_of_center_position=72041181 | ||
|entrez_id=100128494 | |entrez_id=100128494 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC100128494 | |gene_description=uncharacterized LOC100128494 | ||
| − | |gene_name= | + | |gene_id=4926 |
| + | |gene_name=nuclear mitotic apparatus protein 1 | ||
| + | |gene_source=HGNC:8059 | ||
| + | |gene_symbol=NUMA1 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:8059 | ||
|nearest_ensembl=ENSG00000251143 | |nearest_ensembl=ENSG00000251143 | ||
|nearest_promoter_id=NR_104178 | |nearest_promoter_id=NR_104178 | ||
|nearest_refseq=NR_104178 | |nearest_refseq=NR_104178 | ||
|nearest_unigene=Hs.713607 | |nearest_unigene=Hs.713607 | ||
| − | |tata_box= | + | |num_trans=4926 |
| + | |species=human | ||
| + | |start=72041175 | ||
| + | |start_of_center_position=72041180 | ||
| + | |strand=- | ||
| + | |tata_box=11(TGCCTTTAAAGA,-,0.00),12(GCCTTTAAAGAA,+,0.00),12(GCCTTTAAAGAA,-,0.00) | ||
| + | |transcript_name=ENST00000542977.5 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_121135.1 | |tss_id=hg_121135.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=F5H4J1 | ||
}} | }} | ||
Latest revision as of 01:13, 20 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 72041180 |
|---|---|
| End of the center position in the TSS region: | 72041181 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000542977.5 |
|---|---|
| Distance: | 39 |
| Num_trans: | 4926 |
| All_trans: | HGNC:8059 |
TATA-Box annotation
| Distance to TSS: | 26890 |
|---|---|
| Nearest PromoterID: | NR_104178 |
| Entrez ID: | 100128494 |
| Nearest Unigene: | Hs.713607 |
| Nearest Refseq: | NR_104178 |
| Nearest Ensembl: | ENSG00000251143 |
| Gene Name: | nuclear mitotic apparatus protein 1 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100128494 |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 11(TGCCTTTAAAGA,-,0.00),12(GCCTTTAAAGAA,+,0.00),12(GCCTTTAAAGAA,-,0.00) |
