Difference between revisions of "TSS:Hg 121794.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |KOX-1= | ||
| + | |RENOX= | ||
| + | |all_trans=HGNC:7891 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=0 | ||
|distance_to_tss=-5 | |distance_to_tss=-5 | ||
| + | |end=89490994 | ||
| + | |end_of_center_position=89490983 | ||
|entrez_id=50507 | |entrez_id=50507 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
| − | |gene_alias=KOX | + | |gene_alias=KOX{{!}}KOX-1{{!}}RENOX |
|gene_description=NADPH oxidase 4 | |gene_description=NADPH oxidase 4 | ||
| − | |gene_name=NOX4 | + | |gene_id=50507 |
| + | |gene_name=NADPH oxidase 4 | ||
| + | |gene_source=HGNC:7891 | ||
| + | |gene_symbol=NOX4 | ||
| + | |gene_synonyms=KOX KOX-1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7891 | ||
|nearest_ensembl=ENSG00000086991 | |nearest_ensembl=ENSG00000086991 | ||
|nearest_promoter_id=NM_001291927 | |nearest_promoter_id=NM_001291927 | ||
|nearest_refseq=NM_016931 | |nearest_refseq=NM_016931 | ||
|nearest_unigene=Hs.371036 | |nearest_unigene=Hs.371036 | ||
| − | |tata_box= | + | |num_trans=50507 |
| + | |species=human | ||
| + | |start=89490971 | ||
| + | |start_of_center_position=89490982 | ||
| + | |strand=- | ||
| + | |tata_box=73(CCCTTTAAACAT,+,0.00) | ||
| + | |transcript_name=AK298328 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_121794.1 | |tss_id=hg_121794.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B7Z523 Q9NPH5 | ||
}} | }} | ||
Latest revision as of 01:27, 20 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 89490982 |
|---|---|
| End of the center position in the TSS region: | 89490983 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK298328 |
|---|---|
| Distance: | 0 |
| Num_trans: | 50507 |
| All_trans: | HGNC:7891 |
TATA-Box annotation
| Distance to TSS: | -5 |
|---|---|
| Nearest PromoterID: | NM_001291927 |
| Entrez ID: | 50507 |
| Nearest Unigene: | Hs.371036 |
| Nearest Refseq: | NM_016931 |
| Nearest Ensembl: | ENSG00000086991 |
| Gene Name: | NADPH oxidase 4 |
| Gene Alias: | KOX|KOX-1|RENOX |
| Gene Description: | NADPH oxidase 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 73(CCCTTTAAACAT,+,0.00) |
