Difference between revisions of "TSS:Hg 96311.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000422420.1:131 uc010miz.4:131 BC038540:131 |chr=chr9 |cpg_percent=0.01 |distance=131 |distance_to_tss=-104232 |end=22113547 |entrez_id=1030 |gc_p...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |INK4B= |
| + | |MTS2= | ||
| + | |P15= | ||
| + | |TP15= | ||
| + | |all_trans=HGNC:34341 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=119 |
|distance_to_tss=-104232 | |distance_to_tss=-104232 | ||
|end=22113547 | |end=22113547 | ||
| + | |end_of_center_position=22113545 | ||
|entrez_id=1030 | |entrez_id=1030 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
| − | |gene_alias=CDK4I | + | |gene_alias=CDK4I{{!}}INK4B{{!}}MTS2{{!}}P15{{!}}TP15{{!}}p15INK4b |
|gene_description=cyclin dependent kinase inhibitor 2B | |gene_description=cyclin dependent kinase inhibitor 2B | ||
|gene_id=100048912 | |gene_id=100048912 | ||
| Line 14: | Line 19: | ||
|gene_source=HGNC:34341 | |gene_source=HGNC:34341 | ||
|gene_symbol=CDKN2B-AS1 | |gene_symbol=CDKN2B-AS1 | ||
| − | |gene_synonyms=ANRIL CDKN2B-AS | + | |gene_synonyms=ANRIL CDKN2B-AS NCRNA00089 PCAT12 RP11-145E5.4 p15AS |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:34341 | |hgnc_mgi_id=HGNC:34341 | ||
| Line 21: | Line 26: | ||
|nearest_refseq=NM_004936 | |nearest_refseq=NM_004936 | ||
|nearest_unigene=Hs.72901 | |nearest_unigene=Hs.72901 | ||
| − | |num_trans= | + | |num_trans=100048912 |
| + | |p15INK4b= | ||
|species=human | |species=human | ||
|start=22113542 | |start=22113542 | ||
| + | |start_of_center_position=22113544 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000422420. | + | |transcript_name=ENST00000422420.2 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_96311.1 | |tss_id=hg_96311.1 | ||
Latest revision as of 17:21, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 22113544 |
|---|---|
| End of the center position in the TSS region: | 22113545 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000422420.2 |
|---|---|
| Distance: | 119 |
| Num_trans: | 100048912 |
| All_trans: | HGNC:34341 |
TATA-Box annotation
| Distance to TSS: | -104232 |
|---|---|
| Nearest PromoterID: | NM_078487 |
| Entrez ID: | 1030 |
| Nearest Unigene: | Hs.72901 |
| Nearest Refseq: | NM_004936 |
| Nearest Ensembl: | ENSG00000147883 |
| Gene Name: | CDKN2B antisense RNA 1 |
| Gene Alias: | CDK4I|INK4B|MTS2|P15|TP15|p15INK4b |
| Gene Description: | cyclin dependent kinase inhibitor 2B |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
