Difference between revisions of "TSS:Hg 98089.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000374165.5:0 uc004bho.6:0 BC033037:0 NM_152786:12 NM_001278630:13 AK301872:13 AK313867:-24 NM_001278629:-35 ENST00000288462.4:46 uc004bhp.5:46 BC...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |CHRAC17= |
| + | |YBL1= | ||
| + | |all_trans=HGNC:23570 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-12 | |distance_to_tss=-12 | ||
|end=113410696 | |end=113410696 | ||
| + | |end_of_center_position=113410688 | ||
|entrez_id=54107 | |entrez_id=54107 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| − | |gene_alias=CHARAC17 | + | |gene_alias=CHARAC17{{!}}CHRAC17{{!}}CHRAC2{{!}}YBL1{{!}}p17 |
| − | |gene_description= | + | |gene_description=DNA polymerase epsilon 3, accessory subunit |
|gene_id=257169 | |gene_id=257169 | ||
|gene_name=chromosome 9 open reading frame 43 | |gene_name=chromosome 9 open reading frame 43 | ||
| Line 18: | Line 21: | ||
|hgnc_mgi_id=HGNC:23570 | |hgnc_mgi_id=HGNC:23570 | ||
|nearest_ensembl=ENSG00000148229 | |nearest_ensembl=ENSG00000148229 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_017443 |
|nearest_refseq=NM_017443 | |nearest_refseq=NM_017443 | ||
|nearest_unigene=Hs.108112 | |nearest_unigene=Hs.108112 | ||
| − | |num_trans= | + | |num_trans=257169 |
| + | |p17= | ||
|species=human | |species=human | ||
|start=113410678 | |start=113410678 | ||
| + | |start_of_center_position=113410687 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=BC033037 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_98089.1 | |tss_id=hg_98089.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 18:00, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 113410687 |
|---|---|
| End of the center position in the TSS region: | 113410688 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC033037 |
|---|---|
| Distance: | 0 |
| Num_trans: | 257169 |
| All_trans: | HGNC:23570 |
TATA-Box annotation
| Distance to TSS: | -12 |
|---|---|
| Nearest PromoterID: | NM_017443 |
| Entrez ID: | 54107 |
| Nearest Unigene: | Hs.108112 |
| Nearest Refseq: | NM_017443 |
| Nearest Ensembl: | ENSG00000148229 |
| Gene Name: | chromosome 9 open reading frame 43 |
| Gene Alias: | CHARAC17|CHRAC17|CHRAC2|YBL1|p17 |
| Gene Description: | DNA polymerase epsilon 3, accessory subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
