Difference between revisions of "TSS:Mm 100500.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK134816:0 AK166969:0 AK028168:13 AK002757:13 AK168337:21 AK005328:21 ENSMUST00000043627.7:-23 NM_027204:23 uc007mta.1:23 BC005712:23 BC019565:25 ENSMUS...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |1500031N16Rik= |
| + | |MRP-L12= | ||
| + | |Rpml12= | ||
| + | |all_trans=MGI:1926273 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=4 |
|end=120484646 | |end=120484646 | ||
| + | |end_of_center_position=120484641 | ||
|entrez_id=56282 | |entrez_id=56282 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| − | |gene_alias=0610034O11Rik | + | |gene_alias=0610034O11Rik{{!}}1500031N16Rik{{!}}L12mt{{!}}MRP-L12{{!}}Rpml12 |
|gene_description=mitochondrial ribosomal protein L12 | |gene_description=mitochondrial ribosomal protein L12 | ||
|gene_id=56282 | |gene_id=56282 | ||
| Line 21: | Line 25: | ||
|nearest_refseq=NM_027204 | |nearest_refseq=NM_027204 | ||
|nearest_unigene=Mm.133851 | |nearest_unigene=Mm.133851 | ||
| − | |num_trans= | + | |num_trans=56282 |
|species=mouse | |species=mouse | ||
|start=120484635 | |start=120484635 | ||
| + | |start_of_center_position=120484640 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK134816 AK166969 | |transcript_name=AK134816 AK166969 | ||
| Line 29: | Line 34: | ||
|tss_id=mm_100500.1 | |tss_id=mm_100500.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q9DB15 |
}} | }} | ||
Latest revision as of 10:39, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 120484640 |
|---|---|
| End of the center position in the TSS region: | 120484641 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK134816 AK166969 |
|---|---|
| Distance: | 0 |
| Num_trans: | 56282 |
| All_trans: | MGI:1926273 |
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_027204 |
| Entrez ID: | 56282 |
| Nearest Unigene: | Mm.133851 |
| Nearest Refseq: | NM_027204 |
| Nearest Ensembl: | ENSMUSG00000039640 |
| Gene Name: | mitochondrial ribosomal protein L12 |
| Gene Alias: | 0610034O11Rik|1500031N16Rik|L12mt|MRP-L12|Rpml12 |
| Gene Description: | mitochondrial ribosomal protein L12 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
