Difference between revisions of "TSS:Mm 101217.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |AA409782= |
| + | |Arp2= | ||
| + | |D6Ertd746e= | ||
| + | |all_trans=MGI:1913963 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=50 | |distance_to_tss=50 | ||
|end=20112925 | |end=20112925 | ||
| + | |end_of_center_position=20112901 | ||
|entrez_id=66713 | |entrez_id=66713 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=4921510D23Rik | + | |gene_alias=4921510D23Rik{{!}}AA409782{{!}}Arp2{{!}}D6Ertd746e |
|gene_description=ARP2 actin-related protein 2 | |gene_description=ARP2 actin-related protein 2 | ||
|gene_id=66713 | |gene_id=66713 | ||
| Line 18: | Line 22: | ||
|hgnc_mgi_id=MGI:1913963 | |hgnc_mgi_id=MGI:1913963 | ||
|nearest_ensembl=ENSMUSG00000020152 | |nearest_ensembl=ENSMUSG00000020152 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001362899 |
|nearest_refseq=NM_146243 | |nearest_refseq=NM_146243 | ||
|nearest_unigene=Mm.259045 | |nearest_unigene=Mm.259045 | ||
| − | |num_trans= | + | |num_trans=66713 |
|species=mouse | |species=mouse | ||
|start=20112876 | |start=20112876 | ||
| + | |start_of_center_position=20112900 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000000137.7 ENSMUST00000134779.1 BC027799 | |transcript_name=ENSMUST00000000137.7 ENSMUST00000134779.1 BC027799 | ||
Latest revision as of 10:55, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 20112900 |
|---|---|
| End of the center position in the TSS region: | 20112901 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000000137.7 ENSMUST00000134779.1 BC027799 |
|---|---|
| Distance: | 0 |
| Num_trans: | 66713 |
| All_trans: | MGI:1913963 |
TATA-Box annotation
| Distance to TSS: | 50 |
|---|---|
| Nearest PromoterID: | NM_001362899 |
| Entrez ID: | 66713 |
| Nearest Unigene: | Mm.259045 |
| Nearest Refseq: | NM_146243 |
| Nearest Ensembl: | ENSMUSG00000020152 |
| Gene Name: | ARP2 actin-related protein 2 |
| Gene Alias: | 4921510D23Rik|AA409782|Arp2|D6Ertd746e |
| Gene Description: | ARP2 actin-related protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
