Difference between revisions of "TSS:Mm 130084.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=uc007xgm.1:25 AK008010:25 BC037508:71 ENSMUST00000049968.7:-292 NM_001013022:-292 uc007xgn.1:-292 BC087962:-292 |chr=chr15 |cpg_percent=0.04 |distance=2...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1917363 |
|chr=chr15 | |chr=chr15 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=298 | |distance_to_tss=298 | ||
|end=89378962 | |end=89378962 | ||
| + | |end_of_center_position=89378956 | ||
|entrez_id=70113 | |entrez_id=70113 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001013022 | |nearest_refseq=NM_001013022 | ||
|nearest_unigene=Mm.247273 | |nearest_unigene=Mm.247273 | ||
| − | |num_trans= | + | |num_trans=70113 |
|species=mouse | |species=mouse | ||
|start=89378949 | |start=89378949 | ||
| + | |start_of_center_position=89378955 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENSMUST00000227834.1 AK008010 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_130084.1 | |tss_id=mm_130084.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A2I3BQN6 |
}} | }} | ||
Latest revision as of 21:29, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 89378955 |
|---|---|
| End of the center position in the TSS region: | 89378956 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000227834.1 AK008010 |
|---|---|
| Distance: | 25 |
| Num_trans: | 70113 |
| All_trans: | MGI:1917363 |
TATA-Box annotation
| Distance to TSS: | 298 |
|---|---|
| Nearest PromoterID: | NM_001013022 |
| Entrez ID: | 70113 |
| Nearest Unigene: | Mm.247273 |
| Nearest Refseq: | NM_001013022 |
| Nearest Ensembl: | ENSMUSG00000047394 |
| Gene Name: | outer dense fiber of sperm tails 3B |
| Gene Alias: | 2010001J22Rik |
| Gene Description: | outer dense fiber of sperm tails 3B |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
