Difference between revisions of "TSS:Hg 105670.1"
From referenceTSS
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| Line 2: | Line 2: | ||
|P-DLG5= | |P-DLG5= | ||
|PDLG= | |PDLG= | ||
| − | |all_trans=ENST00000434097.2 | + | |all_trans=ENST00000434097.2:33 BC067888:33 DQ585990:-150 DQ586710:-283 ENST00000600739.1:333 DQ577285:-463 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=33 | |distance=33 | ||
| − | |distance_to_tss= | + | |distance_to_tss=143932 |
|end=77782833 | |end=77782833 | ||
| + | |end_of_center_position=77782824 | ||
|entrez_id=9231 | |entrez_id=9231 | ||
|gc_percent=0.482587 | |gc_percent=0.482587 | ||
| − | |gene_alias=LP-DLG | + | |gene_alias=LP-DLG{{!}}P-DLG5{{!}}PDLG |
|gene_description=discs large MAGUK scaffold protein 5 | |gene_description=discs large MAGUK scaffold protein 5 | ||
|gene_name=DLG5 | |gene_name=DLG5 | ||
| Line 18: | Line 19: | ||
|nearest_refseq=NM_004747 | |nearest_refseq=NM_004747 | ||
|nearest_unigene=Hs.652690 | |nearest_unigene=Hs.652690 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=77782813 | |start=77782813 | ||
| + | |start_of_center_position=77782823 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000434097.2 | + | |transcript_name=ENST00000434097.2 BC067888 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105670.1 | |tss_id=hg_105670.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:19, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 77782823 |
|---|---|
| End of the center position in the TSS region: | 77782824 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000434097.2 BC067888 |
|---|---|
| Distance: | 33 |
| Num_trans: | 6 |
| All_trans: | ENST00000434097.2:33 BC067888:33 DQ585990:-150 DQ586710:-283 ENST00000600739.1:333 DQ577285:-463 |
TATA-Box annotation
| Distance to TSS: | 143932 |
|---|---|
| Nearest PromoterID: | NM_004747 |
| Entrez ID: | 9231 |
| Nearest Unigene: | Hs.652690 |
| Nearest Refseq: | NM_004747 |
| Nearest Ensembl: | ENSG00000151208 |
| Gene Name: | DLG5 |
| Gene Alias: | LP-DLG|P-DLG5|PDLG |
| Gene Description: | discs large MAGUK scaffold protein 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.482587 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
