Difference between revisions of "TSS:Hg 105747.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 3: | Line 3: | ||
|Cyp-D= | |Cyp-D= | ||
|CypD= | |CypD= | ||
| − | |all_trans= | + | |all_trans=HGNC:16493 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance=-64 | |distance=-64 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-70203 |
|end=79277290 | |end=79277290 | ||
| + | |end_of_center_position=79277267 | ||
|entrez_id=10105 | |entrez_id=10105 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| − | |gene_alias=CYP3 | + | |gene_alias=CYP3{{!}}CyP-M{{!}}Cyp-D{{!}}CypD |
|gene_description=peptidylprolyl isomerase F | |gene_description=peptidylprolyl isomerase F | ||
|gene_id=57178 | |gene_id=57178 | ||
| Line 24: | Line 25: | ||
|nearest_refseq=NM_005729 | |nearest_refseq=NM_005729 | ||
|nearest_unigene=Hs.381072 | |nearest_unigene=Hs.381072 | ||
| − | |num_trans= | + | |num_trans=57178 |
|species=human | |species=human | ||
|start=79277242 | |start=79277242 | ||
| + | |start_of_center_position=79277266 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000478357.1 | + | |transcript_name=ENST00000478357.1 AK024490 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105747.1 | |tss_id=hg_105747.1 | ||
Latest revision as of 19:37, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 79277266 |
|---|---|
| End of the center position in the TSS region: | 79277267 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000478357.1 AK024490 |
|---|---|
| Distance: | -64 |
| Num_trans: | 57178 |
| All_trans: | HGNC:16493 |
TATA-Box annotation
| Distance to TSS: | -70203 |
|---|---|
| Nearest PromoterID: | NM_005729 |
| Entrez ID: | 10105 |
| Nearest Unigene: | Hs.381072 |
| Nearest Refseq: | NM_005729 |
| Nearest Ensembl: | ENSG00000108179 |
| Gene Name: | zinc finger MIZ-type containing 1 |
| Gene Alias: | CYP3|CyP-M|Cyp-D|CypD |
| Gene Description: | peptidylprolyl isomerase F |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
