Difference between revisions of "TSS:Hg 10261.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.095 |distance_to_tss=50 |entrez_id=1676 |gc_percent=0.646766 |gene_alias=DFF-45|DFF1|ICAD |gene_description=DNA fragmentation factor subunit alpha |...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |DFF1= | ||
| + | |ICAD= | ||
| + | |all_trans=HGNC:2772 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=23 | ||
| + | |end=10472537 | ||
| + | |end_of_center_position=10472506 | ||
|entrez_id=1676 | |entrez_id=1676 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| − | |gene_alias=DFF-45 | + | |gene_alias=DFF-45{{!}}DFF1{{!}}ICAD |
|gene_description=DNA fragmentation factor subunit alpha | |gene_description=DNA fragmentation factor subunit alpha | ||
| − | |gene_name=DFFA | + | |gene_id=1676 |
| + | |gene_name=DNA fragmentation factor subunit alpha | ||
| + | |gene_source=HGNC:2772 | ||
| + | |gene_symbol=DFFA | ||
| + | |gene_synonyms=DFF-45 DFF1 DFF45 ICAD | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:2772 | ||
|nearest_ensembl=ENSG00000160049 | |nearest_ensembl=ENSG00000160049 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_004401 |
|nearest_refseq=NM_004401 | |nearest_refseq=NM_004401 | ||
|nearest_unigene=Hs.484782 | |nearest_unigene=Hs.484782 | ||
| + | |num_trans=1676 | ||
| + | |species=human | ||
| + | |start=10472474 | ||
| + | |start_of_center_position=10472505 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000377038.8 ENST00000476658.5 ENST00000377036.2 BC007721 BC000037 U91985 AK222546 BC007112 AK313317 AF087573 AF103799 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10261.1 | |tss_id=hg_10261.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024R4H5 K7ERT1 O00273 Q53HN4 | ||
}} | }} | ||
Latest revision as of 18:31, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 10472505 |
|---|---|
| End of the center position in the TSS region: | 10472506 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000377038.8 ENST00000476658.5 ENST00000377036.2 BC007721 BC000037 U91985 AK222546 BC007112 AK313317 AF087573 AF103799 |
|---|---|
| Distance: | 0 |
| Num_trans: | 1676 |
| All_trans: | HGNC:2772 |
TATA-Box annotation
| Distance to TSS: | 23 |
|---|---|
| Nearest PromoterID: | NM_004401 |
| Entrez ID: | 1676 |
| Nearest Unigene: | Hs.484782 |
| Nearest Refseq: | NM_004401 |
| Nearest Ensembl: | ENSG00000160049 |
| Gene Name: | DNA fragmentation factor subunit alpha |
| Gene Alias: | DFF-45|DFF1|ICAD |
| Gene Description: | DNA fragmentation factor subunit alpha |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
