Difference between revisions of "TSS:Hg 106044.1"
From referenceTSS
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| Line 8: | Line 8: | ||
|PTEN1= | |PTEN1= | ||
|TEP1= | |TEP1= | ||
| − | |all_trans= | + | |all_trans=HGNC:36342 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=20 | |distance=20 | ||
| − | |distance_to_tss= | + | |distance_to_tss=81856 |
|end=87945482 | |end=87945482 | ||
| + | |end_of_center_position=87945481 | ||
|entrez_id=5728 | |entrez_id=5728 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
| − | |gene_alias=10q23del | + | |gene_alias=10q23del{{!}}BZS{{!}}CWS1{{!}}DEC{{!}}GLM2{{!}}MHAM{{!}}MMAC1{{!}}PTEN1{{!}}PTENbeta{{!}}TEP1 |
|gene_description=phosphatase and tensin homolog | |gene_description=phosphatase and tensin homolog | ||
| − | |gene_name= | + | |gene_id= |
| + | |gene_name=ribosomal protein L11 pseudogene 3 | ||
| + | |gene_source=HGNC:36342 | ||
| + | |gene_symbol=RPL11P3 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:36342 | ||
|nearest_ensembl=ENSG00000171862 | |nearest_ensembl=ENSG00000171862 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001304718 |
|nearest_refseq=NM_000314 | |nearest_refseq=NM_000314 | ||
|nearest_unigene=Hs.500466 | |nearest_unigene=Hs.500466 | ||
| − | |num_trans= | + | |num_trans= |
|species=human | |species=human | ||
|start=87945479 | |start=87945479 | ||
| + | |start_of_center_position=87945480 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000395256.2 | |transcript_name=ENST00000395256.2 | ||
| Line 32: | Line 39: | ||
|tss_id=hg_106044.1 | |tss_id=hg_106044.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 19:44, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 87945480 |
|---|---|
| End of the center position in the TSS region: | 87945481 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000395256.2 |
|---|---|
| Distance: | 20 |
| Num_trans: | |
| All_trans: | HGNC:36342 |
TATA-Box annotation
| Distance to TSS: | 81856 |
|---|---|
| Nearest PromoterID: | NM_001304718 |
| Entrez ID: | 5728 |
| Nearest Unigene: | Hs.500466 |
| Nearest Refseq: | NM_000314 |
| Nearest Ensembl: | ENSG00000171862 |
| Gene Name: | ribosomal protein L11 pseudogene 3 |
| Gene Alias: | 10q23del|BZS|CWS1|DEC|GLM2|MHAM|MMAC1|PTEN1|PTENbeta|TEP1 |
| Gene Description: | phosphatase and tensin homolog |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
