Difference between revisions of "TSS:Mm 161391.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1306801 |
|chr=chr14 | |chr=chr14 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=-418 | |distance=-418 | ||
| − | |distance_to_tss= | + | |distance_to_tss=2355 |
|end=93888314 | |end=93888314 | ||
| + | |end_of_center_position=93888314 | ||
|entrez_id=211712 | |entrez_id=211712 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=MGI:1306801 | |hgnc_mgi_id=MGI:1306801 | ||
|nearest_ensembl=ENSMUSG00000055421 | |nearest_ensembl=ENSMUSG00000055421 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001081377 |
|nearest_refseq=NM_001081377 | |nearest_refseq=NM_001081377 | ||
|nearest_unigene=Mm.37126 | |nearest_unigene=Mm.37126 | ||
| − | |num_trans= | + | |num_trans=211712 |
|species=mouse | |species=mouse | ||
|start=93888313 | |start=93888313 | ||
| + | |start_of_center_position=93888313 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000068992.7 | |transcript_name=ENSMUST00000068992.7 | ||
Latest revision as of 09:00, 27 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 93888313 |
|---|---|
| End of the center position in the TSS region: | 93888314 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000068992.7 |
|---|---|
| Distance: | -418 |
| Num_trans: | 211712 |
| All_trans: | MGI:1306801 |
TATA-Box annotation
| Distance to TSS: | 2355 |
|---|---|
| Nearest PromoterID: | NM_001081377 |
| Entrez ID: | 211712 |
| Nearest Unigene: | Mm.37126 |
| Nearest Refseq: | NM_001081377 |
| Nearest Ensembl: | ENSMUSG00000055421 |
| Gene Name: | protocadherin 9 |
| Gene Alias: | - |
| Gene Description: | protocadherin 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
