Difference between revisions of "TSS:Hg 106405.1"
From referenceTSS
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|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=1880 |
|end=96718650 | |end=96718650 | ||
| + | |end_of_center_position=96718634 | ||
|entrez_id=118788 | |entrez_id=118788 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
| Line 18: | Line 19: | ||
|species=human | |species=human | ||
|start=96718617 | |start=96718617 | ||
| + | |start_of_center_position=96718633 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-49(GCCCATAAATAG,-,0.00),-47(CCATAAATAGCC,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 18:37, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 96718633 |
|---|---|
| End of the center position in the TSS region: | 96718634 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 1880 |
|---|---|
| Nearest PromoterID: | NM_152309 |
| Entrez ID: | 118788 |
| Nearest Unigene: | Hs.310456 |
| Nearest Refseq: | NM_152309 |
| Nearest Ensembl: | ENSG00000155629 |
| Gene Name: | PIK3AP1 |
| Gene Alias: | BCAP |
| Gene Description: | phosphoinositide-3-kinase adaptor protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -49(GCCCATAAATAG,-,0.00),-47(CCATAAATAGCC,+,0.00) |
