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Difference between revisions of "TSS:Hg 106428.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AB074890:-171 BC034476:-221 ENST00000371021.4:-245 uc001knc.2:-245 AK307245:-245 U58975:-245 NM_005479:-247
+
|all_trans=HGNC:3944
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.08
 
|cpg_percent=0.08
 
|distance=-171
 
|distance=-171
|distance_to_tss=266
+
|distance_to_tss=260
 
|end=97319551
 
|end=97319551
 +
|end_of_center_position=97319532
 
|entrez_id=10023
 
|entrez_id=10023
 
|gc_percent=0.711443
 
|gc_percent=0.711443
 
|gene_alias=-
 
|gene_alias=-
|gene_description="FRAT1, WNT signaling pathway regulator"
+
|gene_description=FRAT regulator of WNT signaling pathway 1
 
|gene_id=10023
 
|gene_id=10023
|gene_name=frequently rearranged in advanced T-cell lymphomas 1
+
|gene_name=FRAT regulator of WNT signaling pathway 1
 
|gene_source=HGNC:3944
 
|gene_source=HGNC:3944
 
|gene_symbol=FRAT1
 
|gene_symbol=FRAT1
Line 21: Line 22:
 
|nearest_refseq=NM_005479
 
|nearest_refseq=NM_005479
 
|nearest_unigene=Hs.126057
 
|nearest_unigene=Hs.126057
|num_trans=7
+
|num_trans=10023
 
|species=human
 
|species=human
 
|start=97319511
 
|start=97319511
 +
|start_of_center_position=97319531
 
|strand=+
 
|strand=+
 
|transcript_name=AB074890
 
|transcript_name=AB074890

Latest revision as of 19:52, 19 July 2021

Basic information about the TSS


TSS ID:hg_106428.1
Species:human
Chr:chr10
TSS Classification:yes
Start:97319511
End:97319551
Strand:+
TSS Score:1
Start of the center position in the TSS region:97319531
End of the center position in the TSS region:97319532



Gene and protein annotation


Transcript_name:AB074890
Distance:-171
GeneID:10023
HGNC/MGI_ID:HGNC:3944
UniProt_ID:
Gene_name:FRAT regulator of WNT signaling pathway 1
Gene_symbol:FRAT1
Gene_synonyms:
Gene_source:HGNC:3944



Transcript annotation


Transcript_name:AB074890
Distance:-171
Num_trans:10023
All_trans:HGNC:3944



TATA-Box annotation


Distance to TSS:260
Nearest PromoterID:NM_005479
Entrez ID:10023
Nearest Unigene:Hs.126057
Nearest Refseq:NM_005479
Nearest Ensembl:ENSG00000165879
Gene Name:FRAT regulator of WNT signaling pathway 1
Gene Alias:-
Gene Description:FRAT regulator of WNT signaling pathway 1
Gene Type:protein-coding
CpG%:0.08
GC%:0.711443
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):