Difference between revisions of "TSS:Hg 106458.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|PIK42A= | |PIK42A= | ||
| + | |all_trans=LF345636:-391 MA581213:-391 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=-391 |
|distance_to_tss=8955 | |distance_to_tss=8955 | ||
|end=97649643 | |end=97649643 | ||
| + | |end_of_center_position=97649642 | ||
|entrez_id=55361 | |entrez_id=55361 | ||
|gc_percent=0.41791 | |gc_percent=0.41791 | ||
| − | |gene_alias=PI4KII | + | |gene_alias=PI4KII{{!}}PIK42A |
|gene_description=phosphatidylinositol 4-kinase type 2 alpha | |gene_description=phosphatidylinositol 4-kinase type 2 alpha | ||
|gene_name=PI4K2A | |gene_name=PI4K2A | ||
| Line 16: | Line 18: | ||
|nearest_refseq=NM_018425 | |nearest_refseq=NM_018425 | ||
|nearest_unigene=Hs.25300 | |nearest_unigene=Hs.25300 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=97649639 | |start=97649639 | ||
| + | |start_of_center_position=97649641 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF345636 MA581213 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_106458.1 | |tss_id=hg_106458.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:38, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 97649641 |
|---|---|
| End of the center position in the TSS region: | 97649642 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF345636 MA581213 |
|---|---|
| Distance: | -391 |
| Num_trans: | 2 |
| All_trans: | LF345636:-391 MA581213:-391 |
TATA-Box annotation
| Distance to TSS: | 8955 |
|---|---|
| Nearest PromoterID: | NM_018425 |
| Entrez ID: | 55361 |
| Nearest Unigene: | Hs.25300 |
| Nearest Refseq: | NM_018425 |
| Nearest Ensembl: | ENSG00000155252 |
| Gene Name: | PI4K2A |
| Gene Alias: | PI4KII|PIK42A |
| Gene Description: | phosphatidylinositol 4-kinase type 2 alpha |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.41791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
