Difference between revisions of "TSS:Hg 107446.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:14335 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=18 |
|end=122374766 | |end=122374766 | ||
| + | |end_of_center_position=122374726 | ||
|entrez_id=59338 | |entrez_id=59338 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=HGNC:14335 | |hgnc_mgi_id=HGNC:14335 | ||
|nearest_ensembl=ENSG00000107679 | |nearest_ensembl=ENSG00000107679 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001001974 |
|nearest_refseq=NM_021622 | |nearest_refseq=NM_021622 | ||
|nearest_unigene=Hs.643512 | |nearest_unigene=Hs.643512 | ||
| − | |num_trans= | + | |num_trans=59338 |
|species=human | |species=human | ||
|start=122374685 | |start=122374685 | ||
| + | |start_of_center_position=122374725 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000494222.5 ENST00000368990.7 ENST00000368989.6 | + | |transcript_name=ENST00000494222.5 ENST00000368990.7 ENST00000368989.6 AK314660 BC001136 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_107446.1 | |tss_id=hg_107446.1 | ||
Latest revision as of 20:15, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 122374725 |
|---|---|
| End of the center position in the TSS region: | 122374726 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000494222.5 ENST00000368990.7 ENST00000368989.6 AK314660 BC001136 |
|---|---|
| Distance: | 0 |
| Num_trans: | 59338 |
| All_trans: | HGNC:14335 |
TATA-Box annotation
| Distance to TSS: | 18 |
|---|---|
| Nearest PromoterID: | NM_001001974 |
| Entrez ID: | 59338 |
| Nearest Unigene: | Hs.643512 |
| Nearest Refseq: | NM_021622 |
| Nearest Ensembl: | ENSG00000107679 |
| Gene Name: | pleckstrin homology domain containing A1 |
| Gene Alias: | TAPP1 |
| Gene Description: | pleckstrin homology domain containing A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
