Difference between revisions of "TSS:Mm 22696.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_029289:0 uc012cnq.1:0 AK005586:0 ENSMUST00000029080.4:-27 AM040460:210 |chr=chr3 |cpg_percent=0.025 |distance=0 |distance_to_tss=-1 |end=17948450 |en...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |AV209098= |
| + | |all_trans=MGI:1922689 | ||
|chr=chr3 | |chr=chr3 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-1 | |distance_to_tss=-1 | ||
|end=17948450 | |end=17948450 | ||
| + | |end_of_center_position=17948444 | ||
|entrez_id=75439 | |entrez_id=75439 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| − | |gene_alias=1700001F04Rik | + | |gene_alias=1700001F04Rik{{!}}AV209098 |
|gene_description=cysteine-rich perinuclear theca 12 | |gene_description=cysteine-rich perinuclear theca 12 | ||
|gene_id=75439 | |gene_id=75439 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_029289 | |nearest_refseq=NM_029289 | ||
|nearest_unigene=Mm.27023 | |nearest_unigene=Mm.27023 | ||
| − | |num_trans= | + | |num_trans=75439 |
|species=mouse | |species=mouse | ||
|start=17948436 | |start=17948436 | ||
| + | |start_of_center_position=17948443 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AK005586 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_22696.1 | |tss_id=mm_22696.1 | ||
Latest revision as of 15:15, 27 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 17948443 |
|---|---|
| End of the center position in the TSS region: | 17948444 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK005586 |
|---|---|
| Distance: | 0 |
| Num_trans: | 75439 |
| All_trans: | MGI:1922689 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_029289 |
| Entrez ID: | 75439 |
| Nearest Unigene: | Mm.27023 |
| Nearest Refseq: | NM_029289 |
| Nearest Ensembl: | ENSMUSG00000027564 |
| Gene Name: | cysteine-rich perinuclear theca 12 |
| Gene Alias: | 1700001F04Rik|AV209098 |
| Gene Description: | cysteine-rich perinuclear theca 12 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
