Difference between revisions of "TSS:Hg 102899.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=-24648 |entrez_id=56751 |gc_percent=0.477612 |gene_alias=- |gene_description=BarH like homeobox 1 |gene_name=BARHL1 |gene_type=...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| + | |distance=NA | ||
|distance_to_tss=-24648 | |distance_to_tss=-24648 | ||
| + | |end=132557959 | ||
| + | |end_of_center_position=132557958 | ||
|entrez_id=56751 | |entrez_id=56751 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_020064 | |nearest_refseq=NM_020064 | ||
|nearest_unigene=Hs.283809 | |nearest_unigene=Hs.283809 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=132557956 | ||
| + | |start_of_center_position=132557957 | ||
| + | |strand=- | ||
| + | |tata_box=0(CACTCTAAAAGA,-,0.00),43(GCTTATAAACTC,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_102899.1 | |tss_id=hg_102899.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:14, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 132557957 |
|---|---|
| End of the center position in the TSS region: | 132557958 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -24648 |
|---|---|
| Nearest PromoterID: | NM_020064 |
| Entrez ID: | 56751 |
| Nearest Unigene: | Hs.283809 |
| Nearest Refseq: | NM_020064 |
| Nearest Ensembl: | ENSG00000125492 |
| Gene Name: | BARHL1 |
| Gene Alias: | - |
| Gene Description: | BarH like homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 0(CACTCTAAAAGA,-,0.00),43(GCTTATAAACTC,+,0.00) |
