Difference between revisions of "TSS:Hg 103047.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |NCRNA00094= | ||
| + | |all_trans=HGNC:1104 | ||
| + | |bA374P20.3= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| − | |distance_to_tss= | + | |distance=-268 |
| + | |distance_to_tss=6957 | ||
| + | |end=134032440 | ||
| + | |end_of_center_position=134032438 | ||
|entrez_id=266655 | |entrez_id=266655 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
| − | |gene_alias=LP2477| | + | |gene_alias=LINC00094{{!}}LP2477{{!}}NCRNA00094 |
| − | | | + | |gene_description=BRD3 opposite strand |
| − | | | + | |gene_id=8019 |
| − | |gene_type= | + | |gene_name=bromodomain containing 3 |
| + | |gene_source=HGNC:1104 | ||
| + | |gene_symbol=BRD3 | ||
| + | |gene_synonyms=KIAA0043 ORFX RING3L | ||
| + | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:1104 | ||
|nearest_ensembl=ENSG00000235106 | |nearest_ensembl=ENSG00000235106 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001355256 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_001355256 |
|nearest_unigene=Hs.654869 | |nearest_unigene=Hs.654869 | ||
| + | |num_trans=8019 | ||
| + | |species=human | ||
| + | |start=134032435 | ||
| + | |start_of_center_position=134032437 | ||
| + | |strand=- | ||
| + | |transcript_name=AK123322 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103047.1 | |tss_id=hg_103047.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:40, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 134032437 |
|---|---|
| End of the center position in the TSS region: | 134032438 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK123322 |
|---|---|
| Distance: | -268 |
| Num_trans: | 8019 |
| All_trans: | HGNC:1104 |
TATA-Box annotation
| Distance to TSS: | 6957 |
|---|---|
| Nearest PromoterID: | NM_001355256 |
| Entrez ID: | 266655 |
| Nearest Unigene: | Hs.654869 |
| Nearest Refseq: | NM_001355256 |
| Nearest Ensembl: | ENSG00000235106 |
| Gene Name: | bromodomain containing 3 |
| Gene Alias: | LINC00094|LP2477|NCRNA00094 |
| Gene Description: | BRD3 opposite strand |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
