Difference between revisions of "TSS:Mm 54811.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000095974.3:0 AK163654:0 AK158869:0 AK047763:0 AK018206:0 AK018325:0 ENSMUST00000031891.14:-41 NM_029528:-41 NM_001286584:-41 NM_001113327:-41...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |6530406I18Rik= |
| + | |AV277466= | ||
| + | |all_trans=MGI:1923406 | ||
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=63 | |distance_to_tss=63 | ||
|end=42324599 | |end=42324599 | ||
| + | |end_of_center_position=42324577 | ||
|entrez_id=76156 | |entrez_id=76156 | ||
|gc_percent=0.830846 | |gc_percent=0.830846 | ||
| − | |gene_alias=6330503C03Rik | + | |gene_alias=6330503C03Rik{{!}}6530406I18Rik{{!}}AV277466 |
| − | |gene_description= | + | |gene_description=family with sequence similarity 131, member B |
|gene_id=76156 | |gene_id=76156 | ||
| − | |gene_name= | + | |gene_name=family with sequence similarity 131, member B |
|gene_source=MGI:1923406 | |gene_source=MGI:1923406 | ||
|gene_symbol=Fam131b | |gene_symbol=Fam131b | ||
| Line 18: | Line 21: | ||
|hgnc_mgi_id=MGI:1923406 | |hgnc_mgi_id=MGI:1923406 | ||
|nearest_ensembl=ENSMUSG00000029861 | |nearest_ensembl=ENSMUSG00000029861 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001113327 |
|nearest_refseq=NM_029528 | |nearest_refseq=NM_029528 | ||
|nearest_unigene=Mm.234314 | |nearest_unigene=Mm.234314 | ||
| − | |num_trans= | + | |num_trans=76156 |
|species=mouse | |species=mouse | ||
|start=42324554 | |start=42324554 | ||
| + | |start_of_center_position=42324576 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000095974.3 AK163654 AK158869 AK047763 AK018206 AK018325 | |transcript_name=ENSMUST00000095974.3 AK163654 AK158869 AK047763 AK018206 AK018325 | ||
Latest revision as of 03:04, 28 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 42324576 |
|---|---|
| End of the center position in the TSS region: | 42324577 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000095974.3 AK163654 AK158869 AK047763 AK018206 AK018325 |
|---|---|
| Distance: | 0 |
| Num_trans: | 76156 |
| All_trans: | MGI:1923406 |
TATA-Box annotation
| Distance to TSS: | 63 |
|---|---|
| Nearest PromoterID: | NM_001113327 |
| Entrez ID: | 76156 |
| Nearest Unigene: | Mm.234314 |
| Nearest Refseq: | NM_029528 |
| Nearest Ensembl: | ENSMUSG00000029861 |
| Gene Name: | family with sequence similarity 131, member B |
| Gene Alias: | 6330503C03Rik|6530406I18Rik|AV277466 |
| Gene Description: | family with sequence similarity 131, member B |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.830846 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
