Difference between revisions of "TSS:Mm 64381.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |WP34= |
| + | |all_trans=MGI:96832 | ||
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=31 | |distance_to_tss=31 | ||
|end=142471910 | |end=142471910 | ||
| + | |end_of_center_position=142471875 | ||
|entrez_id=16985 | |entrez_id=16985 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| − | |gene_alias=Lsp-1 | + | |gene_alias=Lsp-1{{!}}WP34{{!}}p50{{!}}pp52 |
|gene_description=lymphocyte specific 1 | |gene_description=lymphocyte specific 1 | ||
|gene_id=16985 | |gene_id=16985 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_019391 | |nearest_refseq=NM_019391 | ||
|nearest_unigene=Mm.234003 | |nearest_unigene=Mm.234003 | ||
| − | |num_trans= | + | |num_trans=16985 |
| + | |p50= | ||
| + | |pp52= | ||
|species=mouse | |species=mouse | ||
|start=142471838 | |start=142471838 | ||
| + | |start_of_center_position=142471874 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000038946.8 ENSMUST00000128986.7 | + | |transcript_name=ENSMUST00000038946.8 ENSMUST00000128986.7 M90316 AK031587 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_64381.1 | |tss_id=mm_64381.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=P19973 |
}} | }} | ||
Latest revision as of 06:38, 28 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 142471874 |
|---|---|
| End of the center position in the TSS region: | 142471875 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000038946.8 ENSMUST00000128986.7 M90316 AK031587 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16985 |
| All_trans: | MGI:96832 |
TATA-Box annotation
| Distance to TSS: | 31 |
|---|---|
| Nearest PromoterID: | NM_019391 |
| Entrez ID: | 16985 |
| Nearest Unigene: | Mm.234003 |
| Nearest Refseq: | NM_019391 |
| Nearest Ensembl: | ENSMUSG00000018819 |
| Gene Name: | lymphocyte specific 1 |
| Gene Alias: | Lsp-1|WP34|p50|pp52 |
| Gene Description: | lymphocyte specific 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
