Difference between revisions of "TSS:Mm 64390.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000126149.7:10 |chr=chr7 |cpg_percent=0.005 |distance=10 |distance_to_tss=-9835 |end=142489007 |entrez_id=21957 |gc_percent=0.492537 |gene_alia...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:96832 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-9835 | |distance_to_tss=-9835 | ||
|end=142489007 | |end=142489007 | ||
| + | |end_of_center_position=142489002 | ||
|entrez_id=21957 | |entrez_id=21957 | ||
|gc_percent=0.492537 | |gc_percent=0.492537 | ||
|gene_alias=fTnT | |gene_alias=fTnT | ||
| − | |gene_description= | + | |gene_description=troponin T3, skeletal, fast |
|gene_id=16985 | |gene_id=16985 | ||
|gene_name=lymphocyte specific 1 | |gene_name=lymphocyte specific 1 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=MGI:96832 | |hgnc_mgi_id=MGI:96832 | ||
|nearest_ensembl=ENSMUSG00000061723 | |nearest_ensembl=ENSMUSG00000061723 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001347552 |
|nearest_refseq=NM_011620 | |nearest_refseq=NM_011620 | ||
|nearest_unigene=Mm.389992 | |nearest_unigene=Mm.389992 | ||
| − | |num_trans= | + | |num_trans=16985 |
|species=mouse | |species=mouse | ||
|start=142488995 | |start=142488995 | ||
| + | |start_of_center_position=142489001 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000126149.7 | |transcript_name=ENSMUST00000126149.7 | ||
Latest revision as of 06:38, 28 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 142489001 |
|---|---|
| End of the center position in the TSS region: | 142489002 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000126149.7 |
|---|---|
| Distance: | 10 |
| Num_trans: | 16985 |
| All_trans: | MGI:96832 |
TATA-Box annotation
| Distance to TSS: | -9835 |
|---|---|
| Nearest PromoterID: | NM_001347552 |
| Entrez ID: | 21957 |
| Nearest Unigene: | Mm.389992 |
| Nearest Refseq: | NM_011620 |
| Nearest Ensembl: | ENSMUSG00000061723 |
| Gene Name: | lymphocyte specific 1 |
| Gene Alias: | fTnT |
| Gene Description: | troponin T3, skeletal, fast |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
