Difference between revisions of "TSS:Hg 112266.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 3: | Line 3: | ||
|P2= | |P2= | ||
|RPP2= | |RPP2= | ||
| − | |all_trans= | + | |all_trans=HGNC:10377 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=2 |
|end=809977 | |end=809977 | ||
| + | |end_of_center_position=809970 | ||
|entrez_id=6181 | |entrez_id=6181 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
| − | |gene_alias=D11S2243E | + | |gene_alias=D11S2243E{{!}}LP2{{!}}P2{{!}}RPP2 |
|gene_description=ribosomal protein lateral stalk subunit P2 | |gene_description=ribosomal protein lateral stalk subunit P2 | ||
|gene_id=6181 | |gene_id=6181 | ||
| Line 24: | Line 25: | ||
|nearest_refseq=NM_001004 | |nearest_refseq=NM_001004 | ||
|nearest_unigene=Hs.437594 | |nearest_unigene=Hs.437594 | ||
| − | |num_trans= | + | |num_trans=6181 |
|species=human | |species=human | ||
|start=809961 | |start=809961 | ||
| + | |start_of_center_position=809969 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000532004.5 | + | |transcript_name=ENST00000532004.5 ENST00000321153.9 BC005354 D28411 BC005920 AK311954 AK130959 M17887 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_112266.1 | |tss_id=hg_112266.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A024RCA7 P05387 |
}} | }} | ||
Latest revision as of 21:59, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 809969 |
|---|---|
| End of the center position in the TSS region: | 809970 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000532004.5 ENST00000321153.9 BC005354 D28411 BC005920 AK311954 AK130959 M17887 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6181 |
| All_trans: | HGNC:10377 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_001004 |
| Entrez ID: | 6181 |
| Nearest Unigene: | Hs.437594 |
| Nearest Refseq: | NM_001004 |
| Nearest Ensembl: | ENSG00000177600 |
| Gene Name: | ribosomal protein lateral stalk subunit P2 |
| Gene Alias: | D11S2243E|LP2|P2|RPP2 |
| Gene Description: | ribosomal protein lateral stalk subunit P2 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
