Difference between revisions of "TSS:Hg 112306.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:28703 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=2159 | |distance_to_tss=2159 | ||
|end=830427 | |end=830427 | ||
| + | |end_of_center_position=830420 | ||
|entrez_id=283229 | |entrez_id=283229 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=HGNC:28703 | |hgnc_mgi_id=HGNC:28703 | ||
|nearest_ensembl=ENSG00000177685 | |nearest_ensembl=ENSG00000177685 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_173584 |
|nearest_refseq=NM_173584 | |nearest_refseq=NM_173584 | ||
|nearest_unigene=Hs.660936 | |nearest_unigene=Hs.660936 | ||
| − | |num_trans= | + | |num_trans=283229 |
|species=human | |species=human | ||
|start=830411 | |start=830411 | ||
| + | |start_of_center_position=830419 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000526531 | + | |transcript_name=ENST00000526531.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_112306.1 | |tss_id=hg_112306.1 | ||
Latest revision as of 22:00, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 830419 |
|---|---|
| End of the center position in the TSS region: | 830420 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000526531.1 |
|---|---|
| Distance: | 58 |
| Num_trans: | 283229 |
| All_trans: | HGNC:28703 |
TATA-Box annotation
| Distance to TSS: | 2159 |
|---|---|
| Nearest PromoterID: | NM_173584 |
| Entrez ID: | 283229 |
| Nearest Unigene: | Hs.660936 |
| Nearest Refseq: | NM_173584 |
| Nearest Ensembl: | ENSG00000177685 |
| Gene Name: | calcium release activated channel regulator 2B |
| Gene Alias: | EFCAB4A |
| Gene Description: | calcium release activated channel regulator 2B |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
