Difference between revisions of "TSS:Mm 99196.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK045877:65 AK204666:-156 AK192836:-158 AK195947:-158 AK198173:-158 ENSMUST00000092663.3:-173 AF218250:-173 AF218251:-173 AB022321:-179 U13836:-191 AK21...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |ATP6a1= |
| + | |Atp6n1= | ||
| + | |Atp6n1a= | ||
| + | |Atpv0a1= | ||
| + | |Vpp-1= | ||
| + | |Vpp1= | ||
| + | |all_trans=MGI:103286 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=65 | |distance=65 | ||
| − | |distance_to_tss= | + | |distance_to_tss=1597 |
|end=101011997 | |end=101011997 | ||
| + | |end_of_center_position=101011996 | ||
|entrez_id=11975 | |entrez_id=11975 | ||
|gc_percent=0.313433 | |gc_percent=0.313433 | ||
| − | |gene_alias=AA959968 | + | |gene_alias=AA959968{{!}}ATP6a1{{!}}Atp6n1{{!}}Atp6n1a{{!}}Atpv0a1{{!}}Vpp-1{{!}}Vpp1 |
| − | |gene_description= | + | |gene_description=ATPase, H+ transporting, lysosomal V0 subunit A1 |
|gene_id=11975 | |gene_id=11975 | ||
| − | |gene_name= | + | |gene_name=ATPase, H+ transporting, lysosomal V0 subunit A1 |
|gene_source=MGI:103286 | |gene_source=MGI:103286 | ||
|gene_symbol=Atp6v0a1 | |gene_symbol=Atp6v0a1 | ||
| Line 18: | Line 25: | ||
|hgnc_mgi_id=MGI:103286 | |hgnc_mgi_id=MGI:103286 | ||
|nearest_ensembl=ENSMUSG00000019302 | |nearest_ensembl=ENSMUSG00000019302 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001362638 |
|nearest_refseq=NM_016920 | |nearest_refseq=NM_016920 | ||
|nearest_unigene=Mm.340818 | |nearest_unigene=Mm.340818 | ||
| − | |num_trans= | + | |num_trans=11975 |
|species=mouse | |species=mouse | ||
|start=101011993 | |start=101011993 | ||
| + | |start_of_center_position=101011995 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK045877 | |transcript_name=AK045877 | ||
Latest revision as of 19:20, 28 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 101011995 |
|---|---|
| End of the center position in the TSS region: | 101011996 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK045877 |
|---|---|
| Distance: | 65 |
| Num_trans: | 11975 |
| All_trans: | MGI:103286 |
TATA-Box annotation
| Distance to TSS: | 1597 |
|---|---|
| Nearest PromoterID: | NM_001362638 |
| Entrez ID: | 11975 |
| Nearest Unigene: | Mm.340818 |
| Nearest Refseq: | NM_016920 |
| Nearest Ensembl: | ENSMUSG00000019302 |
| Gene Name: | ATPase, H+ transporting, lysosomal V0 subunit A1 |
| Gene Alias: | AA959968|ATP6a1|Atp6n1|Atp6n1a|Atpv0a1|Vpp-1|Vpp1 |
| Gene Description: | ATPase, H+ transporting, lysosomal V0 subunit A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.313433 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
