Difference between revisions of "TSS:Mm 99224.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000139857.1:-32 AK166356:-32 uc007lmy.1:-57 |chr=chr11 |cpg_percent=0.03 |distance=-32 |distance_to_tss=9543 |end=101039888 |entrez_id=10246676...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:103286 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=9543 | |distance_to_tss=9543 | ||
|end=101039888 | |end=101039888 | ||
| + | |end_of_center_position=101039883 | ||
|entrez_id=102466767 | |entrez_id=102466767 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| − | |gene_alias=Gm27728 | + | |gene_alias=Gm27728{{!}}mmu-mir-6928 |
|gene_description=microRNA 6928 | |gene_description=microRNA 6928 | ||
|gene_id=11975 | |gene_id=11975 | ||
| − | |gene_name= | + | |gene_name=ATPase, H+ transporting, lysosomal V0 subunit A1 |
|gene_source=MGI:103286 | |gene_source=MGI:103286 | ||
|gene_symbol=Atp6v0a1 | |gene_symbol=Atp6v0a1 | ||
| Line 17: | Line 18: | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=MGI:103286 | |hgnc_mgi_id=MGI:103286 | ||
| + | |mmu-mir-6928= | ||
|nearest_ensembl=ENSMUSG00000098415 | |nearest_ensembl=ENSMUSG00000098415 | ||
|nearest_promoter_id=NR_105893 | |nearest_promoter_id=NR_105893 | ||
|nearest_refseq=NR_105893 | |nearest_refseq=NR_105893 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=11975 |
|species=mouse | |species=mouse | ||
|start=101039877 | |start=101039877 | ||
| + | |start_of_center_position=101039882 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000139857.1 AK166356 | |transcript_name=ENSMUST00000139857.1 AK166356 | ||
Latest revision as of 19:21, 28 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 101039882 |
|---|---|
| End of the center position in the TSS region: | 101039883 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000139857.1 AK166356 |
|---|---|
| Distance: | -32 |
| Num_trans: | 11975 |
| All_trans: | MGI:103286 |
TATA-Box annotation
| Distance to TSS: | 9543 |
|---|---|
| Nearest PromoterID: | NR_105893 |
| Entrez ID: | 102466767 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_105893 |
| Nearest Ensembl: | ENSMUSG00000098415 |
| Gene Name: | ATPase, H+ transporting, lysosomal V0 subunit A1 |
| Gene Alias: | Gm27728|mmu-mir-6928 |
| Gene Description: | microRNA 6928 |
| Gene Type: | ncRNA |
| CpG%: | 0.03 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
