Difference between revisions of "TSS:Mm 99287.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK181812:-141 AK191502:-141 AK200621:-141 AK204228:-141 AK216469:219 AK178228:219 AK182317:219 AK219671:318 AK197152:-330 AK217955:-381 |chr=chr11 |cpg_...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1096366 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-2882 | |distance_to_tss=-2882 | ||
|end=101322189 | |end=101322189 | ||
| + | |end_of_center_position=101322181 | ||
|entrez_id=237940 | |entrez_id=237940 | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
|gene_alias=RAO | |gene_alias=RAO | ||
| − | |gene_description= | + | |gene_description=amine oxidase, copper containing 2 (retina-specific) |
|gene_id=19192 | |gene_id=19192 | ||
| − | |gene_name= | + | |gene_name=proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki) |
|gene_source=MGI:1096366 | |gene_source=MGI:1096366 | ||
|gene_symbol=Psme3 | |gene_symbol=Psme3 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_178932 | |nearest_refseq=NM_178932 | ||
|nearest_unigene=Mm.302277 | |nearest_unigene=Mm.302277 | ||
| − | |num_trans= | + | |num_trans=19192 |
|species=mouse | |species=mouse | ||
|start=101322172 | |start=101322172 | ||
| + | |start_of_center_position=101322180 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AK191502 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_99287.1 | |tss_id=mm_99287.1 | ||
Latest revision as of 19:22, 28 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 101322180 |
|---|---|
| End of the center position in the TSS region: | 101322181 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK191502 |
|---|---|
| Distance: | -141 |
| Num_trans: | 19192 |
| All_trans: | MGI:1096366 |
TATA-Box annotation
| Distance to TSS: | -2882 |
|---|---|
| Nearest PromoterID: | NM_178932 |
| Entrez ID: | 237940 |
| Nearest Unigene: | Mm.302277 |
| Nearest Refseq: | NM_178932 |
| Nearest Ensembl: | ENSMUSG00000078651 |
| Gene Name: | proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki) |
| Gene Alias: | RAO |
| Gene Description: | amine oxidase, copper containing 2 (retina-specific) |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
