Difference between revisions of "TSS:Mm 99332.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK170529:-16 ENSMUST00000134980.1:167 uc007lpa.1:-263 AK075970:-263 ENSMUST00000153185.7:-304 |chr=chr11 |cpg_percent=0.04 |distance=-16 |distance_to_ts...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1338755 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=889 | |distance_to_tss=889 | ||
|end=101465317 | |end=101465317 | ||
| + | |end_of_center_position=101465310 | ||
|entrez_id=26949 | |entrez_id=26949 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_012037 | |nearest_refseq=NM_012037 | ||
|nearest_unigene=Mm.29210 | |nearest_unigene=Mm.29210 | ||
| − | |num_trans= | + | |num_trans=11858 |
|species=mouse | |species=mouse | ||
|start=101465302 | |start=101465302 | ||
| + | |start_of_center_position=101465309 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK170529 | |transcript_name=AK170529 | ||
Latest revision as of 19:23, 28 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 101465309 |
|---|---|
| End of the center position in the TSS region: | 101465310 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK170529 |
|---|---|
| Distance: | -16 |
| Num_trans: | 11858 |
| All_trans: | MGI:1338755 |
TATA-Box annotation
| Distance to TSS: | 889 |
|---|---|
| Nearest PromoterID: | NM_012037 |
| Entrez ID: | 26949 |
| Nearest Unigene: | Mm.29210 |
| Nearest Refseq: | NM_012037 |
| Nearest Ensembl: | ENSMUSG00000034993 |
| Gene Name: | Rho family GTPase 2 |
| Gene Alias: | VAT-1 |
| Gene Description: | vesicle amine transport 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
