Difference between revisions of "TSS:Mm 99333.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000134980.1:0 AK170529:-192 uc007lpa.1:-439 AK075970:-439 ENSMUST00000153185.7:-480 |chr=chr11 |cpg_percent=0.035 |distance=0 |distance_to_tss=...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1338755 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=710 | |distance_to_tss=710 | ||
|end=101465499 | |end=101465499 | ||
| + | |end_of_center_position=101465489 | ||
|entrez_id=26949 | |entrez_id=26949 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_012037 | |nearest_refseq=NM_012037 | ||
|nearest_unigene=Mm.29210 | |nearest_unigene=Mm.29210 | ||
| − | |num_trans= | + | |num_trans=11858 |
|species=mouse | |species=mouse | ||
|start=101465478 | |start=101465478 | ||
| + | |start_of_center_position=101465488 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000134980.1 | |transcript_name=ENSMUST00000134980.1 | ||
Latest revision as of 19:23, 28 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 101465488 |
|---|---|
| End of the center position in the TSS region: | 101465489 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000134980.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11858 |
| All_trans: | MGI:1338755 |
TATA-Box annotation
| Distance to TSS: | 710 |
|---|---|
| Nearest PromoterID: | NM_012037 |
| Entrez ID: | 26949 |
| Nearest Unigene: | Mm.29210 |
| Nearest Refseq: | NM_012037 |
| Nearest Ensembl: | ENSMUSG00000034993 |
| Gene Name: | Rho family GTPase 2 |
| Gene Alias: | VAT-1 |
| Gene Description: | vesicle amine transport 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
