Difference between revisions of "TSS:Mm 99364.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000125409.1:16 ENSMUST00000039152.13:47 NM_144831 | + | |all_trans=LF198903:15 MA434480:15 ENSMUST00000125409.1:16 ENSMUST00000039152.13:47 NM_144831:53 AK153829:53 BC132445:69 AK220485:94 AK172600:114 AK078552:115 AK142226:121 BC065064:124 ENSMUST00000156842.1:126 AK170616:126 ENSMUST00000129741.1:138 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| − | |distance= | + | |distance=15 |
|distance_to_tss=-54 | |distance_to_tss=-54 | ||
|end=101732903 | |end=101732903 | ||
| + | |end_of_center_position=101732902 | ||
|entrez_id=217207 | |entrez_id=217207 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| − | |gene_alias=Ddx8 | + | |gene_alias=Ddx8{{!}}mDEAH6{{!}}mKIAA4096 |
|gene_description=DEAH (Asp-Glu-Ala-His) box polypeptide 8 | |gene_description=DEAH (Asp-Glu-Ala-His) box polypeptide 8 | ||
|gene_id=217207 | |gene_id=217207 | ||
| − | |gene_name= | + | |gene_name=Dhx8 |
|gene_source=MGI:1306823 | |gene_source=MGI:1306823 | ||
|gene_symbol=Dhx8 | |gene_symbol=Dhx8 | ||
| Line 17: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1306823 | |hgnc_mgi_id=MGI:1306823 | ||
| + | |mDEAH6= | ||
| + | |mKIAA4096= | ||
|nearest_ensembl=ENSMUSG00000034931 | |nearest_ensembl=ENSMUSG00000034931 | ||
|nearest_promoter_id=NM_144831 | |nearest_promoter_id=NM_144831 | ||
|nearest_refseq=NM_144831 | |nearest_refseq=NM_144831 | ||
|nearest_unigene=Mm.28186 | |nearest_unigene=Mm.28186 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=mouse | |species=mouse | ||
|start=101732900 | |start=101732900 | ||
| + | |start_of_center_position=101732901 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF198903 MA434480 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99364.1 | |tss_id=mm_99364.1 | ||
Latest revision as of 03:49, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 101732901 |
|---|---|
| End of the center position in the TSS region: | 101732902 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF198903 MA434480 |
|---|---|
| Distance: | 15 |
| Num_trans: | 15 |
| All_trans: | LF198903:15 MA434480:15 ENSMUST00000125409.1:16 ENSMUST00000039152.13:47 NM_144831:53 AK153829:53 BC132445:69 AK220485:94 AK172600:114 AK078552:115 AK142226:121 BC065064:124 ENSMUST00000156842.1:126 AK170616:126 ENSMUST00000129741.1:138 |
TATA-Box annotation
| Distance to TSS: | -54 |
|---|---|
| Nearest PromoterID: | NM_144831 |
| Entrez ID: | 217207 |
| Nearest Unigene: | Mm.28186 |
| Nearest Refseq: | NM_144831 |
| Nearest Ensembl: | ENSMUSG00000034931 |
| Gene Name: | Dhx8 |
| Gene Alias: | Ddx8|mDEAH6|mKIAA4096 |
| Gene Description: | DEAH (Asp-Glu-Ala-His) box polypeptide 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
