Difference between revisions of "TSS:Mm 99719.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK016263:0 ENSMUST00000044462.3:21 BC050746:21 ENSMUST00000142472.7:-44 NM_029467:-44 uc007lyq.1:-44 uc007lyr.1:-44 AK076581:-44 uc056yox.1:-176 AK16206...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |AI429105= |
| + | |all_trans=MGI:1923120 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=49 | |distance_to_tss=49 | ||
|end=106276727 | |end=106276727 | ||
| + | |end_of_center_position=106276722 | ||
|entrez_id=75870 | |entrez_id=75870 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias=4930570F09Rik | + | |gene_alias=4930570F09Rik{{!}}AI429105 |
|gene_description=testicular cell adhesion molecule 1 | |gene_description=testicular cell adhesion molecule 1 | ||
|gene_id=75870 | |gene_id=75870 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_029467 | |nearest_refseq=NM_029467 | ||
|nearest_unigene=Mm.159608 | |nearest_unigene=Mm.159608 | ||
| − | |num_trans= | + | |num_trans=75870 |
|species=mouse | |species=mouse | ||
|start=106276715 | |start=106276715 | ||
| + | |start_of_center_position=106276721 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK016263 | |transcript_name=AK016263 | ||
Latest revision as of 19:32, 28 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 106276721 |
|---|---|
| End of the center position in the TSS region: | 106276722 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK016263 |
|---|---|
| Distance: | 0 |
| Num_trans: | 75870 |
| All_trans: | MGI:1923120 |
TATA-Box annotation
| Distance to TSS: | 49 |
|---|---|
| Nearest PromoterID: | NM_029467 |
| Entrez ID: | 75870 |
| Nearest Unigene: | Mm.159608 |
| Nearest Refseq: | NM_029467 |
| Nearest Ensembl: | ENSMUSG00000020712 |
| Gene Name: | testicular cell adhesion molecule 1 |
| Gene Alias: | 4930570F09Rik|AI429105 |
| Gene Description: | testicular cell adhesion molecule 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
