Difference between revisions of "TSS:Hg 103739.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=1140 |entrez_id=106635547 |gc_percent=0.368159 |gene_alias=- |gene_description="small nucleolar RNA, C/D box 129" |gene_name=SNO...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=NA | ||
|distance_to_tss=1140 | |distance_to_tss=1140 | ||
| + | |end=7185650 | ||
| + | |end_of_center_position=7185644 | ||
|entrez_id=106635547 | |entrez_id=106635547 | ||
|gc_percent=0.368159 | |gc_percent=0.368159 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=small nucleolar RNA, C/D box 129 |
|gene_name=SNORD129 | |gene_name=SNORD129 | ||
|gene_type=snoRNA | |gene_type=snoRNA | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_132972 | |nearest_refseq=NR_132972 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=7185637 | ||
| + | |start_of_center_position=7185643 | ||
| + | |strand=+ | ||
| + | |tata_box=53(GCTTTTATAAAG,+,0.00),53(GCTTTTATAAAG,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_103739.1 | |tss_id=hg_103739.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:34, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 7185643 |
|---|---|
| End of the center position in the TSS region: | 7185644 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 1140 |
|---|---|
| Nearest PromoterID: | NR_132972 |
| Entrez ID: | 106635547 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_132972 |
| Nearest Ensembl: | |
| Gene Name: | SNORD129 |
| Gene Alias: | - |
| Gene Description: | small nucleolar RNA, C/D box 129 |
| Gene Type: | snoRNA |
| CpG%: | 0.01 |
| GC%: | 0.368159 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 53(GCTTTTATAAAG,+,0.00),53(GCTTTTATAAAG,-,0.00) |
