Difference between revisions of "TSS:Hg 117854.1"
From referenceTSS
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|SI-CLP= | |SI-CLP= | ||
|SICLP= | |SICLP= | ||
| − | |all_trans=ENST00000533059.5 | + | |all_trans=ENST00000533059.5:70 ENST00000525840.1:89 ENST00000528154.1:116 ENST00000449825.5:-157 ENST00000533056.5:-157 NM_001142675:-157 AK301245:208 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance= | + | |distance=45 |
|distance_to_tss=163 | |distance_to_tss=163 | ||
|end=914901 | |end=914901 | ||
| + | |end_of_center_position=914896 | ||
|entrez_id=66005 | |entrez_id=66005 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=GL008 | + | |gene_alias=GL008{{!}}SI-CLP{{!}}SICLP |
|gene_description=chitinase domain containing 1 | |gene_description=chitinase domain containing 1 | ||
|gene_id=66005 | |gene_id=66005 | ||
| Line 16: | Line 17: | ||
|gene_source=HGNC:28474 | |gene_source=HGNC:28474 | ||
|gene_symbol=CHID1 | |gene_symbol=CHID1 | ||
| − | |gene_synonyms=FLJ42707 MGC3234 | + | |gene_synonyms=FLJ42707 MGC3234 SI-CLP |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:28474 | |hgnc_mgi_id=HGNC:28474 | ||
| Line 23: | Line 24: | ||
|nearest_refseq=NM_023947 | |nearest_refseq=NM_023947 | ||
|nearest_unigene=Hs.144468 | |nearest_unigene=Hs.144468 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=914889 | |start=914889 | ||
| + | |start_of_center_position=914895 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NM_001142675.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_117854.1 | |tss_id=hg_117854.1 | ||
Latest revision as of 00:01, 20 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 914895 |
|---|---|
| End of the center position in the TSS region: | 914896 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001142675.2 |
|---|---|
| Distance: | 45 |
| Num_trans: | 7 |
| All_trans: | ENST00000533059.5:70 ENST00000525840.1:89 ENST00000528154.1:116 ENST00000449825.5:-157 ENST00000533056.5:-157 NM_001142675:-157 AK301245:208 |
TATA-Box annotation
| Distance to TSS: | 163 |
|---|---|
| Nearest PromoterID: | NM_001142675 |
| Entrez ID: | 66005 |
| Nearest Unigene: | Hs.144468 |
| Nearest Refseq: | NM_023947 |
| Nearest Ensembl: | ENSG00000177830 |
| Gene Name: | chitinase domain containing 1 |
| Gene Alias: | GL008|SI-CLP|SICLP |
| Gene Description: | chitinase domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
