Difference between revisions of "TSS:Hg 118259.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:7640 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=11761 | |distance_to_tss=11761 | ||
|end=2952137 | |end=2952137 | ||
| + | |end_of_center_position=2952132 | ||
|entrez_id=677833 | |entrez_id=677833 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
|gene_alias=ACA54 | |gene_alias=ACA54 | ||
| − | |gene_description= | + | |gene_description=small nucleolar RNA, H/ACA box 54 |
|gene_id=4676 | |gene_id=4676 | ||
|gene_name=nucleosome assembly protein 1 like 4 | |gene_name=nucleosome assembly protein 1 like 4 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_002982 | |nearest_refseq=NR_002982 | ||
|nearest_unigene=Hs.689696 | |nearest_unigene=Hs.689696 | ||
| − | |num_trans= | + | |num_trans=4676 |
|species=human | |species=human | ||
|start=2952126 | |start=2952126 | ||
| + | |start_of_center_position=2952131 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000526023.5 | + | |transcript_name=ENST00000526023.5 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_118259.1 | |tss_id=hg_118259.1 | ||
Latest revision as of 00:10, 20 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 2952131 |
|---|---|
| End of the center position in the TSS region: | 2952132 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000526023.5 |
|---|---|
| Distance: | 90 |
| Num_trans: | 4676 |
| All_trans: | HGNC:7640 |
TATA-Box annotation
| Distance to TSS: | 11761 |
|---|---|
| Nearest PromoterID: | NR_002982 |
| Entrez ID: | 677833 |
| Nearest Unigene: | Hs.689696 |
| Nearest Refseq: | NR_002982 |
| Nearest Ensembl: | ENSG00000207008 |
| Gene Name: | nucleosome assembly protein 1 like 4 |
| Gene Alias: | ACA54 |
| Gene Description: | small nucleolar RNA, H/ACA box 54 |
| Gene Type: | snoRNA |
| CpG%: | 0.015 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
