Difference between revisions of "TSS:Hg 104147.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.135 |distance_to_tss=126 |entrez_id=221079 |gc_percent=0.721393 |gene_alias=ARL8 |gene_description=ADP ribosylation factor like GTPase 5B |gene_name...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:23052 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| − | |distance_to_tss= | + | |distance=-40 |
| + | |distance_to_tss=79 | ||
| + | |end=18659519 | ||
| + | |end_of_center_position=18659511 | ||
|entrez_id=221079 | |entrez_id=221079 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
|gene_alias=ARL8 | |gene_alias=ARL8 | ||
|gene_description=ADP ribosylation factor like GTPase 5B | |gene_description=ADP ribosylation factor like GTPase 5B | ||
| − | |gene_name=ARL5B | + | |gene_id=221079 |
| + | |gene_name=ADP ribosylation factor like GTPase 5B | ||
| + | |gene_source=HGNC:23052 | ||
| + | |gene_symbol=ARL5B | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23052 | ||
|nearest_ensembl=ENSG00000165997 | |nearest_ensembl=ENSG00000165997 | ||
|nearest_promoter_id=NM_178815 | |nearest_promoter_id=NM_178815 | ||
|nearest_refseq=NM_178815 | |nearest_refseq=NM_178815 | ||
|nearest_unigene=Hs.25362 | |nearest_unigene=Hs.25362 | ||
| + | |num_trans=221079 | ||
| + | |species=human | ||
| + | |start=18659501 | ||
| + | |start_of_center_position=18659510 | ||
| + | |strand=+ | ||
| + | |transcript_name=AF494061 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104147.1 | |tss_id=hg_104147.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 19:03, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 18659510 |
|---|---|
| End of the center position in the TSS region: | 18659511 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AF494061 |
|---|---|
| Distance: | -40 |
| Num_trans: | 221079 |
| All_trans: | HGNC:23052 |
TATA-Box annotation
| Distance to TSS: | 79 |
|---|---|
| Nearest PromoterID: | NM_178815 |
| Entrez ID: | 221079 |
| Nearest Unigene: | Hs.25362 |
| Nearest Refseq: | NM_178815 |
| Nearest Ensembl: | ENSG00000165997 |
| Gene Name: | ADP ribosylation factor like GTPase 5B |
| Gene Alias: | ARL8 |
| Gene Description: | ADP ribosylation factor like GTPase 5B |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
