Difference between revisions of "TSS:Hg 135528.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK295423:-10 AK289714:-24 ENST00000462234.5:-38 uc058xps.1:-38 BC045177:-40 AK289600:-57 AL834203:-98 ENST00000496045.5:130 uc058xpt.1:130 ENST000004417...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:26387 |
|chr=chr13 | |chr=chr13 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=-10 | |distance=-10 | ||
| − | |distance_to_tss= | + | |distance_to_tss=182 |
|end=77741408 | |end=77741408 | ||
| + | |end_of_center_position=77741401 | ||
|entrez_id=122060 | |entrez_id=122060 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=HGNC:26387 | |hgnc_mgi_id=HGNC:26387 | ||
|nearest_ensembl=ENSG00000139737 | |nearest_ensembl=ENSG00000139737 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001242870 |
|nearest_refseq=NM_144595 | |nearest_refseq=NM_144595 | ||
|nearest_unigene=Hs.349955 | |nearest_unigene=Hs.349955 | ||
| − | |num_trans= | + | |num_trans=122060 |
|species=human | |species=human | ||
|start=77741393 | |start=77741393 | ||
| + | |start_of_center_position=77741400 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK295423 | |transcript_name=AK295423 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_135528.1 | |tss_id=hg_135528.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 06:25, 20 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 77741400 |
|---|---|
| End of the center position in the TSS region: | 77741401 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK295423 |
|---|---|
| Distance: | -10 |
| Num_trans: | 122060 |
| All_trans: | HGNC:26387 |
TATA-Box annotation
| Distance to TSS: | 182 |
|---|---|
| Nearest PromoterID: | NM_001242870 |
| Entrez ID: | 122060 |
| Nearest Unigene: | Hs.349955 |
| Nearest Refseq: | NM_144595 |
| Nearest Ensembl: | ENSG00000139737 |
| Gene Name: | SLAIN motif family member 1 |
| Gene Alias: | C13orf32 |
| Gene Description: | SLAIN motif family member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
