Difference between revisions of "TSS:Hg 105842.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:25804 | ||
| + | |bA369J21.6= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| + | |distance=0 | ||
|distance_to_tss=43 | |distance_to_tss=43 | ||
| + | |end=80079089 | ||
| + | |end_of_center_position=80079066 | ||
|entrez_id=80195 | |entrez_id=80195 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=C10orf57 | + | |gene_alias=C10orf57{{!}}bA369J21.6 |
|gene_description=transmembrane protein 254 | |gene_description=transmembrane protein 254 | ||
| − | |gene_name=TMEM254 | + | |gene_id=80195 |
| + | |gene_name=transmembrane protein 254 | ||
| + | |gene_source=HGNC:25804 | ||
| + | |gene_symbol=TMEM254 | ||
| + | |gene_synonyms=FLJ13263 bA369J21.6 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:25804 | ||
|nearest_ensembl=ENSG00000133678 | |nearest_ensembl=ENSG00000133678 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001270367 |
|nearest_refseq=NM_025125 | |nearest_refseq=NM_025125 | ||
|nearest_unigene=Hs.169982 | |nearest_unigene=Hs.169982 | ||
| − | |tata_box= | + | |num_trans=80195 |
| + | |species=human | ||
| + | |start=80079042 | ||
| + | |start_of_center_position=80079065 | ||
| + | |strand=+ | ||
| + | |tata_box=-46(TCTTATATGGGG,+,0.00) | ||
| + | |transcript_name=AK309980 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105842.1 | |tss_id=hg_105842.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 19:39, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 80079065 |
|---|---|
| End of the center position in the TSS region: | 80079066 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK309980 |
|---|---|
| Distance: | 0 |
| Num_trans: | 80195 |
| All_trans: | HGNC:25804 |
TATA-Box annotation
| Distance to TSS: | 43 |
|---|---|
| Nearest PromoterID: | NM_001270367 |
| Entrez ID: | 80195 |
| Nearest Unigene: | Hs.169982 |
| Nearest Refseq: | NM_025125 |
| Nearest Ensembl: | ENSG00000133678 |
| Gene Name: | transmembrane protein 254 |
| Gene Alias: | C10orf57|bA369J21.6 |
| Gene Description: | transmembrane protein 254 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -46(TCTTATATGGGG,+,0.00) |
