Difference between revisions of "TSS:Hg 105847.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=23222 |entrez_id=219348 |gc_percent=0.537313 |gene_alias=- |gene_description=placenta specific 9 |gene_name=PLAC9 |gene_type=pr...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=22994 | ||
| + | |end=80155735 | ||
| + | |end_of_center_position=80155724 | ||
|entrez_id=219348 | |entrez_id=219348 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description=placenta | + | |gene_description=placenta associated 9 |
|gene_name=PLAC9 | |gene_name=PLAC9 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000189129 | |nearest_ensembl=ENSG00000189129 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001012973 |
|nearest_refseq=NM_001012973 | |nearest_refseq=NM_001012973 | ||
|nearest_unigene=Hs.204947 | |nearest_unigene=Hs.204947 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=80155712 | ||
| + | |start_of_center_position=80155723 | ||
| + | |strand=+ | ||
| + | |tata_box=-79(GGGTAGAAAAGG,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_105847.1 | |tss_id=hg_105847.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:23, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 80155723 |
|---|---|
| End of the center position in the TSS region: | 80155724 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 22994 |
|---|---|
| Nearest PromoterID: | NM_001012973 |
| Entrez ID: | 219348 |
| Nearest Unigene: | Hs.204947 |
| Nearest Refseq: | NM_001012973 |
| Nearest Ensembl: | ENSG00000189129 |
| Gene Name: | PLAC9 |
| Gene Alias: | - |
| Gene Description: | placenta associated 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -79(GGGTAGAAAAGG,-,0.00) |
