Difference between revisions of "TSS:Hg 10211.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:51913 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_132742 | |nearest_refseq=NR_132742 | ||
|nearest_unigene=Hs.551837 | |nearest_unigene=Hs.551837 | ||
| − | |num_trans= | + | |num_trans=106614088 |
|species=human | |species=human | ||
|start=9182282 | |start=9182282 | ||
|start_of_center_position=9182300 | |start_of_center_position=9182300 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-3(CCTTTTCAGGTG,+,0.00) |
| − | |transcript_name= | + | |transcript_name=EF609116 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10211.1 | |tss_id=hg_10211.1 | ||
Latest revision as of 18:20, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 9182300 |
|---|---|
| End of the center position in the TSS region: | 9182301 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | EF609116 |
|---|---|
| Distance: | -19 |
| Num_trans: | 106614088 |
| All_trans: | HGNC:51913 |
TATA-Box annotation
| Distance to TSS: | 37 |
|---|---|
| Nearest PromoterID: | NR_132742 |
| Entrez ID: | 106614088 |
| Nearest Unigene: | Hs.551837 |
| Nearest Refseq: | NR_132742 |
| Nearest Ensembl: | ENSG00000228526 |
| Gene Name: | MIR34A host gene |
| Gene Alias: | - |
| Gene Description: | MIR34A host gene |
| Gene Type: | ncRNA |
| CpG%: | 0.105 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -3(CCTTTTCAGGTG,+,0.00) |
