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Difference between revisions of "TSS:Mm 28109.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK144373:81 ENSMUST00000191695.1:-86 AF126427:-86 BC058730:139 ENSMUST00000077524.3:245 NM_011839:245 uc008prj.1:245 AK053645:245 BC046628:279
+
|all_trans=MGI:1346022
 
|chr=chr3
 
|chr=chr3
 
|cpg_percent=0.025
 
|cpg_percent=0.025
Line 10: Line 10:
 
|gc_percent=0.457711
 
|gc_percent=0.457711
 
|gene_alias=-
 
|gene_alias=-
|gene_description=mab-21-like 2 (C. elegans)
+
|gene_description=mab-21-like 2
 
|gene_id=23937
 
|gene_id=23937
|gene_name=mab-21-like 2 (C. elegans)
+
|gene_name=mab-21-like 2
 
|gene_source=MGI:1346022
 
|gene_source=MGI:1346022
 
|gene_symbol=Mab21l2
 
|gene_symbol=Mab21l2
Line 22: Line 22:
 
|nearest_refseq=NM_011839
 
|nearest_refseq=NM_011839
 
|nearest_unigene=Mm.389466
 
|nearest_unigene=Mm.389466
|num_trans=9
+
|num_trans=23937
 
|species=mouse
 
|species=mouse
 
|start=86548527
 
|start=86548527

Latest revision as of 17:15, 27 July 2021

Basic information about the TSS


TSS ID:mm_28109.1
Species:mouse
Chr:chr3
TSS Classification:yes
Start:86548527
End:86548543
Strand:-
TSS Score:1
Start of the center position in the TSS region:86548535
End of the center position in the TSS region:86548536



Gene and protein annotation


Transcript_name:AK144373
Distance:81
GeneID:23937
HGNC/MGI_ID:MGI:1346022
UniProt_ID:
Gene_name:mab-21-like 2
Gene_symbol:Mab21l2
Gene_synonyms:
Gene_source:MGI:1346022



Transcript annotation


Transcript_name:AK144373
Distance:81
Num_trans:23937
All_trans:MGI:1346022



TATA-Box annotation


Distance to TSS:-252
Nearest PromoterID:NM_011839
Entrez ID:23937
Nearest Unigene:Mm.389466
Nearest Refseq:NM_011839
Nearest Ensembl:ENSMUSG00000057777
Gene Name:mab-21-like 2
Gene Alias:-
Gene Description:mab-21-like 2
Gene Type:protein-coding
CpG%:0.025
GC%:0.457711
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):