Difference between revisions of "TSS:Hg 10422.1"
From referenceTSS
| Line 8: | Line 8: | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.185 | |cpg_percent=0.185 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=88 |
|end=13700277 | |end=13700277 | ||
|end_of_center_position=13700276 | |end_of_center_position=13700276 | ||
|entrez_id=7799 | |entrez_id=7799 | ||
|gc_percent=0.810945 | |gc_percent=0.810945 | ||
| − | |gene_alias=HUMHOXY1 | + | |gene_alias=HUMHOXY1{{!}}KMT8{{!}}KMT8A{{!}}MTB-ZF{{!}}RIZ{{!}}RIZ1{{!}}RIZ2 |
|gene_description=PR/SET domain 2 | |gene_description=PR/SET domain 2 | ||
|gene_name=PRDM2 | |gene_name=PRDM2 | ||
Latest revision as of 17:45, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 13700275 |
|---|---|
| End of the center position in the TSS region: | 13700276 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 88 |
|---|---|
| Nearest PromoterID: | NM_001135610 |
| Entrez ID: | 7799 |
| Nearest Unigene: | Hs.371823 |
| Nearest Refseq: | NM_012231 |
| Nearest Ensembl: | ENSG00000116731 |
| Gene Name: | PRDM2 |
| Gene Alias: | HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2 |
| Gene Description: | PR/SET domain 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.185 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
