Difference between revisions of "TSS:Hg 1039.1"
From referenceTSS
| Line 2: | Line 2: | ||
|PAX7B= | |PAX7B= | ||
|RMS2= | |RMS2= | ||
| − | |all_trans=KJ897296:17 ENST00000400661.3 | + | |all_trans=KJ897296:17 ENST00000400661.3:-42 BC121165:-42 BC121166:-42 DQ322591:-45 Z35141:-64 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=17 | |distance=17 | ||
| − | |distance_to_tss= | + | |distance_to_tss=730 |
|end=18631587 | |end=18631587 | ||
|end_of_center_position=18631577 | |end_of_center_position=18631577 | ||
|entrez_id=5081 | |entrez_id=5081 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=HUP1 | + | |gene_alias=HUP1{{!}}PAX7B{{!}}RMS2 |
|gene_description=paired box 7 | |gene_description=paired box 7 | ||
|gene_name=PAX7 | |gene_name=PAX7 | ||
| Line 19: | Line 19: | ||
|nearest_refseq=NM_002584 | |nearest_refseq=NM_002584 | ||
|nearest_unigene=Hs.113253 | |nearest_unigene=Hs.113253 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=18631565 | |start=18631565 | ||
Latest revision as of 17:37, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 18631576 |
|---|---|
| End of the center position in the TSS region: | 18631577 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | KJ897296 |
|---|---|
| Distance: | 17 |
| Num_trans: | 6 |
| All_trans: | KJ897296:17 ENST00000400661.3:-42 BC121165:-42 BC121166:-42 DQ322591:-45 Z35141:-64 |
TATA-Box annotation
| Distance to TSS: | 730 |
|---|---|
| Nearest PromoterID: | NM_002584 |
| Entrez ID: | 5081 |
| Nearest Unigene: | Hs.113253 |
| Nearest Refseq: | NM_002584 |
| Nearest Ensembl: | ENSG00000009709 |
| Gene Name: | PAX7 |
| Gene Alias: | HUP1|PAX7B|RMS2 |
| Gene Description: | paired box 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
